Rosa chinensis (China rose): 112167368
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Entry
112167368 CDS
T06020
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112167368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112167368
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112167368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
112167368
NCBI-ProteinID:
XP_024160149
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All DBs
Position
5:35543618..35548753
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AA seq
309 aa
AA seq
DB search
MYAPFGGPIGSKPGSAGAPPDPEMASAEHLVLELSNPELRENALLELSKKRELFQDLAPL
LWNSFGTVAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMYFLNAHI
PLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGS
ELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVASLADQHSSRLLKHIIRC
YLRLSENPRACDALRSCLPDILRDATFSVCLREDQTTRRWLQQLLHNVGVSRVPGLQAGA
GFDHMMVNQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaccgtttggaggtccgattggttccaaacccggttccgccggagccccaccc
gacccggaaatggcgtcggcggagcacttggttctcgaactcagcaaccccgagcttcgt
gagaatgctctcctcgaactctccaagaagagagaactgtttcaagatttggctccattg
ttgtggaattctttcggtactgttgctgctctgttgcaggaaatagtttcaatataccct
gttttatcaccaccaaatctaactcctgcacaatcaaatcgagtttgcaatgctcttgct
ctgctccagtgtgttgcttctcacccagacacaaggatgtatttccttaatgctcatata
cctttatatttgtacccttttcttaatactacaagcaagtcaagaccttttgagtacttg
aggcttaccagcttaggtgtcattggcgccttggtgaaggttgatgatacagaagtgatt
agcttccttctctcaacggaaataattcccctatgccttcgcactatggaaatgggcagt
gagctgtcaaaaacagttgccacatttattgttcaaaagattttgttggatgatgtgggc
ttggattatatttgtactacagctgagcggttttttgcagtaggtcgagtgttggggaat
atggttgcatcacttgctgatcaacattcatcgcgtttattaaaacatatcatccgttgt
taccttagattatccgaaaacccgagggcttgtgatgctttaagaagttgtcttcctgat
attttaagagatgctactttcagtgtctgccttcgggaagatcaaactacaaggagatgg
ctgcagcagttgcttcacaatgttggagttagtcgggttcctgggcttcaggctggggca
gggtttgatcatatgatggtgaatcaatag
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