KEGG   Rosa chinensis (China rose): 112167613
Entry
112167613         CDS       T06020                                 
Name
(RefSeq) RNA-binding protein Y14A
  KO
K12876  RNA-binding protein 8A
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03013  Nucleocytoplasmic transport
rcn03015  mRNA surveillance pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112167613
  09122 Translation
   03013 Nucleocytoplasmic transport
    112167613
   03015 mRNA surveillance pathway
    112167613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112167613
   03041 Spliceosome [BR:rcn03041]
    112167613
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     112167613
Spliceosome [BR:rcn03041]
 Complex C
  Other components
   EJC/TREX
    112167613
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 112167613
NCBI-ProteinID: XP_024160423
LinkDB
Position
5:55307565..55311138
AA seq 206 aa
MANNADVEAVDFEPEDDDLMDEDGAVDAEPAASPRAPLPKLKSAITGASSASLSAPKKTK
GRGFREDPNAERNTRLAVSDLDGLNALDGLEPQRSIEGWIILVTGIHEEAQEDDLHATFG
EFGEIKNLHLNLDRRTGFVKGYALIEYENFAEAQAAISRMDGNSVLTQIVNVDWAFSNGS
FLDGSKKKNPRQLRDRRSRSPPRRRF
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgaacaacgcagacgtggaagccgtggactttgagcccgaggacgatgacctcatg
gacgaggacggtgccgtcgacgccgagcccgcagcctccccccgggccccactccccaag
ctcaagtctgctatcaccggcgcctcctccgcctctctctcagctcctaagaagaccaaa
ggtcgaggctttcgcgaagatcccaatgccgaacgcaacacccgcctggctgtctctgac
ttggacggactcaacgccctggacggcctcgagccccagcgatcgatcgagggatggatt
attctggttaccggaatccatgaagaggcacaagaagatgatctgcatgctacatttggt
gaatttggggagataaagaatttgcatttaaatcttgatcgccgtactgggtttgtcaag
ggttatgcgcttattgagtatgagaattttgcggaggcgcaagctgcaatatccagaatg
gacggaaacagtgtacttacacagattgttaatgttgactgggccttcagcaatggatcc
ttccttgatgggtcaaaaaagaagaacccaagacaactccgagatcgtcgctcgaggagt
cctcctaggaggagattttaa

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