Rosa chinensis (China rose): 112167802
Help
Entry
112167802 CDS
T06020
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112167802
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112167802
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112167802
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112167802
Spliceosome [BR:
rcn03041
]
Common components
Common spliceosomal components
SR proteins
112167802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112167802
NCBI-ProteinID:
XP_024160652
LinkDB
All DBs
Position
5:complement(54476004..54477586)
Genome browser
AA seq
145 aa
AA seq
DB search
MVTKNRTFTWPIWSYTRAKRSASPQTSVSPVKGRRSRSLSRSRRSRSRSPSVDATNPGNN
LYVTGLSTRVTSADVEKFFNKEGKVLECHLVTDPRSRESRGFAFVTMETVEDAERCIKYL
NRSVLEGRLVTMEKVWCVYFIEFTI
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggttaccaaaaacagaactttcacttggcctatatggtcatacacgagagcaaaaagg
tctgcttcaccacagacctctgtctcacctgtcaaaggccgccgatcgagatcattgtcg
aggtctagaaggagtcgttctaggagcccatctgtggatgcaaccaatcctggaaacaac
ttgtatgtaacaggcttatccacaagggttacctctgctgatgttgagaaattctttaac
aaagaaggcaaggtgttggagtgccatcttgtaactgaccctcgctccagagaatctcgt
ggatttgcatttgtcacaatggaaactgtagaggatgcagagcgatgcattaagtacttg
aatcgttctgtgcttgaaggtcgactagtcactatggaaaaggtctggtgtgtgtacttc
atcgaattcacaatctaa
DBGET
integrated database retrieval system
