Rosa chinensis (China rose): 112167916
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Entry
112167916 CDS
T06020
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112167916
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112167916
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112167916
NCBI-ProteinID:
XP_024160783
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Position
5:1476764..1478422
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AA seq
385 aa
AA seq
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MANISLLLLLLCILAYNAPTLQAAYASSYSYDTKPTTKNVVDSCWRSNTNWARNRQALAN
CAVGFGKDAIGGKYGRIYVVTTSFDDPINPKPGTLRYGVIQTQPLWIVFAKDMVITLKNE
LIMNSFKTIDGRGAKVEIAYGPCITVQGISHVIIHGISIHDCKPGKSGVVRSTPTHVGRR
LGCDGDSISIFASSHVWVDHCFLAHGADGLIDITHASTAVTVTNNYFSQHDKVMLLGHND
KFTADKIMKVTIAFNRFGAGLIERMPRVRFGYAHVANNRYDEWKMYAIGGSANPTIFSEG
NYFIAPENHDAKQVTKREAYDGWKSWKWRSSNDVLQNGAYFIQSGWGSCYPMYTRTQKFK
VSPGSMVPALTSNAGPLHCIVGKAC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatatcccttctcttactgcttctctgtatactagcctacaatgctccaacg
ttacaagcagcctatgcctcaagctactcctacgacaccaaacccacaacaaagaatgta
gtcgactcatgctggcgcagcaataccaattgggcaagaaatcgccaagccttggctaac
tgcgcagtaggcttcggcaaagatgccattggaggaaaatatgggcgtatttacgtagtc
accacctcgtttgatgaccccataaaccctaaaccgggcaccctccggtatggtgtgatc
caaacgcagccgttgtggatcgtttttgccaaagacatggttatcaccctcaagaatgag
ctcattatgaatagtttcaagaccatagacggtagaggggctaaagtagagattgcatat
ggaccatgcataactgtgcagggtattagtcatgtcattatccatggaataagtattcat
gattgtaagccggggaagtccggcgtggttaggagcactcctacacatgtcgggcggcgc
ctagggtgcgacggtgattccattagtatctttgcttcttcgcatgtttgggttgaccat
tgctttttggcacatggcgctgatggcctcattgatatcacccatgcttccacggcagtc
accgtcactaacaactatttctcccagcacgacaaggtgatgctgcttggacacaatgat
aaatttactgcagataaaattatgaaggtcacaatagcctttaaccgttttggggcaggc
ctaattgaaaggatgccaagggtcagatttggctatgcccatgttgccaacaatagatat
gatgagtggaagatgtacgccattggtggcagtgctaatccaaccattttcagtgaaggc
aactacttcatagctcctgaaaatcatgatgccaaacaggttacgaaaagagaggcctac
gatggttggaagagttggaaatggagatcttctaatgatgtgcttcaaaatggtgcttat
tttattcaatctggatggggaagttgttatccaatgtacactcgaacacagaagttcaag
gtctctccaggatcgatggttcctgctttgacttcaaatgcaggtccactgcactgcatt
gttggtaaagcatgttga
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