Rosa chinensis (China rose): 112167974
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Entry
112167974 CDS
T06020
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112167974
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112167974
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112167974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4_2
Prok-RING_4
Sina_RING
Saccharop_dh_N
zf-C3HC4
Adhesin_P1_C
zf-RING_2
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112167974
NCBI-ProteinID:
XP_024160850
LinkDB
All DBs
Position
5:17176835..17193389
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AA seq
666 aa
AA seq
DB search
MGLPGGSSSGSGGRSGGIYNSVKFKLARSSAAASSSTIGTECYPSLDKVREALKHAGLEV
CYLIIGIHFTENNHGTGDPYEKAISIIEKTLEPFDADNLYHCFGFGDGKAEEAFSFRNDH
SPCKGIKEVLACYNNIVPNVTLSGPTSFAAVINAAVDIVDKSFGQFHTLVLVADNQVTKS
FFNPKSQRLSPEGIKTAESIINASSYPLSIILVGVGYGSCEHMKEFQNIIPKRRFNNFQF
INFTDIENCMSDATPSMKEAAFAFAALKETPKQYKAALQLELIGNITGKAREVVPRSPPV
PHTHHAPATSEQSNLLEPVSDERCRREVTDALWKGLESFNFIVGIDFTKSNEWTGNMRFN
IQNLHASGDTPNPYERVISLLGKTFASPFQKDDFIHCFGFGDVTTVDHEVFSFHGDYSPC
YGFDEVLCCYKRIVRMVELAGRASYAPVIEAAVDIVERSGGQYHVLVIIAAGQVTKSTHT
SKMELSPQEDETIRSIADASSYPLFIIVVGVGDGPWEDMKKFEDKIPVRGNFQFVNFTEI
MSLHSTTSEKQAAFALAARAEVPIHYMTAVERGLLGRRTGKANKIIPRPPPVPKTNCAPP
THEPSDHSPSVMDYRRMTDCCSVCLDSAKDLAFGCGHMTCRECGFRISKCPICRQPILSR
LRLYNV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggcttaccaggaggatcaagcagtggatctggtggaagaagcgggggtatatataac
tcagttaagttcaaacttgcgagatcatccgcggctgcttcctctagcactataggaaca
gaatgctatccatcccttgacaaggtccgggaagcattgaagcatgccggtcttgaagta
tgctatctcattatcggaatccactttacagaaaacaatcacggaacaggtgatccatat
gaaaaggccatctccatcatcgaaaaaactttggaaccatttgatgcagacaacttatat
cattgttttggcttcggtgacggtaaagccgaagaagctttcagctttagaaatgaccat
tcaccttgcaagggtattaaagaagttttggcctgctacaacaatatagttccgaacgta
acactttcagggccaacttcttttgcagcggtaattaatgccgctgtagatattgttgac
aaaagtttcggccaattccatactcttgtccttgttgcagataaccaggttaccaaaagc
ttcttcaatcctaagagtcaaaggttgagtccagaaggaataaaaacagccgaatcaatt
ataaatgcgagttcataccccctctccattattcttgttggagttggttatggatcatgt
gaacacatgaaggagtttcagaacataatccctaagagaagatttaacaattttcagttt
atcaactttactgatattgagaattgtatgtccgatgcaactccctctatgaaagaagca
gcttttgcttttgctgcactcaaggaaactccaaaacagtataaagcagctcttcaactt
gaactgattggaaatataacagggaaagcaagggaagttgtaccacgcagtccaccagtt
cctcacactcatcatgcaccggcaacatctgaacaaagtaaccttttagaacctgtttca
gatgaaagatgccggcgggaggttacagatgccttgtggaaaggtctggagtccttcaat
ttcattgttggaattgactttactaaaagcaatgaatggacaggaaacatgcgattcaac
attcagaacctgcatgcttctggtgatacacctaatccatacgaaagagttatatcttta
ctcgggaaaacttttgctagtccctttcagaaagatgacttcattcattgttttggtttt
ggtgatgttaccacggttgatcacgaggtgtttagctttcacggtgattattcaccctgc
tatggttttgatgaagtcttgtgttgctacaaaagaatagtccgaatggtggaactagca
ggccgagcttcttatgcccctgtaatagaggctgcagtggacattgtggagagaagtggt
ggtcaataccatgtgttagttatcattgcagctggccaggttacgaaaagtacccatact
agcaagatggaattaagtccacaagaagacgaaacaatcagatcgattgcggatgcaagt
tcatatccactcttcattattgttgtcggagttggtgatggtccatgggaagacatgaag
aaatttgaggataagatccctgtacgtggtaattttcagtttgttaactttactgaaatt
atgtctctacattcaactacctctgagaaacaagctgcttttgctcttgctgctcgcgcg
gaagttccgatccactatatgacagctgtcgaacgtggactacttggacgtaggacgggg
aaagcaaacaaaattattccacgccctccacctgttcctaaaactaattgtgcaccgccg
actcatgaaccaagtgatcattcaccatctgttatggattaccgaagaatgacggactgc
tgctcagtctgcttggacagtgcaaaggacctggccttcggctgcggacacatgacttgc
agagaatgcggctttagaatttccaagtgtccaatatgccgccaaccgatcctcagtcgc
ctcaggctttacaatgtgtaa
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