Rosa chinensis (China rose): 112168017
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Entry
112168017 CDS
T06020
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial isoform X1
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112168017
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112168017
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
112168017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
DnaB_C
Toprim
AAA_25
Toprim_2
AAA_29
GT-D
Motif
Other DBs
NCBI-GeneID:
112168017
NCBI-ProteinID:
XP_024160898
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All DBs
Position
5:12688387..12700459
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AA seq
703 aa
AA seq
DB search
MRLLLLHRPLHKLSALSSSTALLMGSKQLLKSTPFTNPSPPSSQTHSFHSHRLVFSAFPP
KPRSKARPFCLRTNGYSYVSHANVKTPKLADLEITDEQRYEALTKKLKEIGIDDEICEPA
QYGHLICPMCKGGDSEEKSLSIFIEKDWSYATWQCHRRKCDWKGRTMAFAGSKSSYKKSK
NSTTDKTKREIAVESLGLEPLCEEVLAFFSERGISRETVQRNKVMQKRCSITDQISIAFT
YWRNGKLISCKYRDINKKFWQEKDTERIFYGLDDIKDTNDIIIVEGEMDKLAMEEAGYRN
CVSVPDGAPPKASPPDKDVPPEEQDTKYQFLWNCKEYLKKESRIILATDGDGPGQALAEE
LARRLGRERCWRVSWPKKNDQVEHFKDANEVLMYLGPAVLKEVIENAELYPIRGLFRFQD
YFDEINAYYHRTYKHDCGVKTGWRDLDDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLY
EGYGWKFALCSMENKVREHARKLLEKHIQKPFFDGRYGGPAERMSVEEFERGKQWLNDTF
HLIRCEDDSLPNIKWVLDLARAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTN
VKRFAQHHACHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGA
LDQVQVCVRKVRNKVAGTIGDAYLSYDRATGRYVDIPKPNEGK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcttcttcttcatcgacctcttcataagctttcagccttatcctcaagcact
gctcttctcatgggttccaagcagctactaaagtccacacctttcacaaacccatctcct
ccttcttcacaaacacactcctttcactctcacagactcgttttctctgcatttccgcct
aaacccaggtccaaagctcggcccttttgcctcaggactaatgggtattcttatgtctca
catgccaatgtcaaaaccccaaaactagctgatttggagataacagatgagcagagatat
gaggctttgacgaaaaagttgaaggagattggcattgatgatgaaatatgtgaacccgcg
cagtacggccacttaatttgtccaatgtgcaaaggtggcgattcagaggaaaagagctta
tccatttttattgaaaaagattggagttatgctacttggcagtgccatcgccgaaaatgt
gattggaaaggtagaacaatggcctttgcaggaagcaagtcttcttataaaaaatcaaag
aatagcacgacagataagacaaaaagggaaatcgcagtggaaagtttaggactggaacca
ctttgtgaggaggttcttgcatttttttcagagcgaggaatatcaagggaaacagtacag
aggaataaagtaatgcaaaagcgttgttccataacagatcagatttctattgcatttact
tattggaggaacggaaagctgattagttgcaagtatcgggacatcaacaaaaagttctgg
caggagaaggatactgaaaggattttttacgggctggatgatataaaggatacaaatgat
atcatcattgtagaaggcgagatggataagcttgcaatggaagaagctggctatcgtaat
tgcgtgagtgtgcctgatggtgctcctcccaaggcttctcctcccgataaggatgtgcca
cctgaagagcaggatacaaagtatcaatttctgtggaactgcaaagagtacttaaagaag
gaatcacgcattatacttgccactgatggagatgggcctggtcaagccctagctgaagaa
cttgcccgccgccttggaagagagagatgctggcgagtcagctggccaaagaaaaatgat
caggttgaacacttcaaagatgcaaacgaggttctcatgtatttgggacctgctgtattg
aaggaagtaattgagaatgctgaattatatcctatacgtggattgttcagatttcaagat
tactttgatgaaattaatgcatattaccatcggacatataaacatgattgcggtgtcaaa
actgggtggagagatctggatgatttatacaatgttgtcccgggtgagttgactatagta
acaggagttcctaattcaggcaagagtgagtggattgatgctctcttgtgcaatctctat
gaaggatatggttggaaatttgcactttgttccatggaaaacaaggttagggagcatgca
cgaaagctgctggagaaacacatacagaagcctttctttgatggacgctatggtggtcct
gctgaacgaatgagtgttgaagaatttgagcgcgggaaacaatggttaaatgacacattt
cacctcataaggtgtgaggatgattcccttccaaatatcaaatgggttcttgatcttgca
cgagcagcagtacttaggcatggggtgcgtggacttgtaattgatccttacaacgagctt
gatcatcaacgtccaccaaaccagacagaaacagagtatgtaagtcagatgcttaccaat
gtcaaacggtttgctcagcatcatgcttgtcatgtttggtttgtagcacatcccagacag
ttgcaccattgggtagggggtcctcctaatctttatgatataagtggaagtgcacatttc
ataaacaaatgtgacaatggaattgtaattcatcgtaatcgggatccagaggctggggcc
cttgatcaagtacaggtctgtgttcgtaaggtacggaataaagtcgcaggaaccataggt
gacgcctatttgtcatatgatagggcaactggtcgatatgtggatattccgaaaccaaac
gagggaaaatag
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