Rosa chinensis (China rose): 112168119
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Entry
112168119 CDS
T06020
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00240
Pyrimidine metabolism
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
112168119
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
112168119
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
112168119
NCBI-ProteinID:
XP_024161008
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All DBs
Position
5:51628450..51635706
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AA seq
345 aa
AA seq
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MASASASSSSSALSRLSSISRHFNPSHPNKDGVALIKISPEVSEALSIGRAVVALESTII
SHGMPYPKNLETAKEVEAIVRENGAVPATIAILDGTPCIGLTIEELERLARLGPRAQKTA
RRDIAHVVATRGNGATTVSATMIFAHMVGIPLFVTGGIGGVHQHGEHTMDISSDLTELGR
TPVAVISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTEASGCKVPCRVDTPDDC
ARLIDANLKLELGTGMLIAVPIPKEHSASGNLIESAIQTALREARDKNITGNAATPFLLA
RVNELTGGASLASNIALVKNNALVGSKIAVALSQIRECCRKGGLE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgtcggcgtcgtcgtcgtcttcagctctctcaagactgtccagtatcagc
agacacttcaatccctcccacccaaacaaggacggtgtggccttaatcaagatttctcca
gaggtttccgaagctttgtcaattgggcgtgccgtcgttgctcttgaatccaccattatt
tcccatgggatgccgtatcccaagaatttggagactgcaaaggaggttgaggcaattgtc
agggaaaatggggctgttcctgccaccattgctatcttggatggcacaccttgcataggt
ctaactatagaagaactggagaggcttgccagattgggtccaagagctcagaagacagct
cgaagagacattgcacatgttgtggcaaccagagggaacggtgcaactactgtttctgca
accatgatttttgctcatatggttggcatcccattgtttgtaacgggaggaattggagga
gtacatcaacatggcgagcatacaatggacatatcttctgatcttactgagcttggaagg
acacctgtagctgtcatctctgctggtgtaaaatcaattttggatatcccaaggaccctc
gaatatttggaaacacagggagtttgtgtagctgcttacaagaccaatgaatttccagca
tttttcacagaagcaagtggctgcaaggtgccttgccgtgtagataccccagatgattgc
gctcggcttatagatgcaaaccttaaacttgagcttggaactggaatgttgattgctgtt
ccaattcctaaagaacactcggcttctggaaatttaattgagtctgcaatacagacagct
cttagagaagctagggataagaacataacaggcaatgctgctactccattcttgcttgca
agagtaaatgaactaactggaggagcatctttggcttcgaacattgccctggtgaagaat
aatgcacttgttggttctaaaattgctgtagcactttcccagatcagagaatgttgtaga
aaaggtggtttggagtaa
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