KEGG   Rosa chinensis (China rose): 112168221
Entry
112168221         CDS       T06020                                 
Name
(RefSeq) DDB1- and CUL4-associated factor 4
  KO
K11799  DDB1- and CUL4-associated factor 4
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    112168221
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112168221
SSDB
Motif
Pfam: Beta-prop_DCAF4 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st EIF3I Gryzun-like Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 112168221
NCBI-ProteinID: XP_024161112
LinkDB
Position
5:15866888..15874186
AA seq 508 aa
MPQDLPGFYYDAEKNRYFPNKGPVPGSRSTAAAASSSAQKLNQEANKCKLTKVRTSKLLQ
ARELYGNVIASSKGRCNFKEEFQKAQASHPVVWKYQGTNKLGDGALERINIDVQTGEGLT
GTDFLLAGGRNGSLSLFEFGKVGQGFHYGMKCLPDLVWPLLNKSQVECRKAPGHIWRPAQ
NTPRMSSSISCIKTFGKHSTENDGSSIRNALVSTLGAEDCGGSLFVINLSELLDFRPNRS
ILRRNIDEVATFNCTVWTADCRSDGSHAVIGTNLGAALVDLETGVKSWLLRSKSDVLAQQ
LVHSGNVVLCGLRNGAIVTVDVREKREGFSARHASHRIRHSPLDTTPGKSSEKWFKLSGN
IHPSHTIKMPSSIACLVSLQFDDQYFLASSMDGTVKLYDHRIIQRGAVQTYEGNVNSHTR
LQLGVDPSERFFISGGEDCNLRLWSIKSGELLFEDKLTNTVTPTVCWQKAEAFKGLQDER
QSYDNVKHDSLGAWLGSAEGIFYVDWEL
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgccccaagatcttcctgggttttattatgatgcggagaagaataggtacttccccaac
aagggcccagtacccggttctcgtagtactgctgctgctgcttcttccagtgctcagaaa
ctgaaccaggaagccaacaaatgtaagctaacaaaagtaagaacttctaagctgcttcag
gctagggagttatatggtaatgtcattgcttccagtaaagggaggtgcaacttcaaggag
gaattccaaaaggcacaagcatcccatcctgtggtttggaagtatcagggaacaaacaag
ctaggtgatggtgctttggagcggataaacattgatgtacagacaggagagggtttaact
ggtacagattttctcttagcaggtggcagaaatggctctttaagtttatttgaattcgga
aaagtcgggcagggttttcattatgggatgaaatgcttgcctgatcttgtctggcctctc
ttaaacaaaagtcaagtagaatgtagaaaagcgcctgggcacatatggagaccagctcaa
aatacaccacggatgtcatcgagtatatcttgtataaaaacatttggcaagcacagcaca
gaaaatgacggttctagcatccggaatgctctggtatctacactaggagctgaggactgt
ggtggatcactttttgttattaaccttagtgaactcttagattttcgtccaaatagatct
atcttaaggcggaacattgatgaagttgcgactttcaactgcactgtttggacagcagat
tgtagatctgatgggagtcatgcagtgattggaaccaatctgggagctgctttggtagat
ctggaaactggggtgaaatcatggctgctgcgtagtaaaagtgatgttttggcacagcaa
cttgttcactcgggaaatgttgttttatgtggactcagaaatggagcaattgtaacggtt
gatgttcgtgagaaacgggaaggattttctgcaagacatgctagtcatagaatacggcac
tcacctttggataccactcctggaaaatctagtgaaaaatggttcaagctttctggaaat
atacatccttctcataccataaaaatgccttcatctattgcatgtttagtatcgcttcag
tttgatgatcagtacttcttggcaagctccatggacggaacggtaaagctttatgaccat
cgtataatccaaagaggagctgtccaaacttatgaggggaatgtgaattcccatactcgt
ttgcagcttggagttgatccatctgagcgattttttatatcaggtggagaggactgcaat
ttaagactttggagtataaagtcaggcgaactgctttttgaggacaagttaacaaataca
gtcaccccaactgtgtgctggcaaaaagctgaagcgtttaaaggattgcaggatgaaagg
caaagctatgataatgttaaacatgatagcttgggggcttggcttggatcggcagaagga
atattttacgtggactgggaactttga

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