Rosa chinensis (China rose): 112168229
Help
Entry
112168229 CDS
T06020
Name
(RefSeq) (-)-germacrene D synthase
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
112168229
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
112168229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Motif
Other DBs
NCBI-GeneID:
112168229
NCBI-ProteinID:
XP_024161123
LinkDB
All DBs
Position
5:complement(32750025..32752631)
Genome browser
AA seq
565 aa
AA seq
DB search
MSLNVVSVASQAPPTLNASTDAGSRRSANFHPSIWGDQFLSYNNTMETNINGEQHVQQLK
EEVKRMLMAPPVQTSLGKLELIDDIQRLGVSYHFEYEIDQTLQQIHHNFNGYCDDDLHTC
ALRFRLLRQHGYNVSCDTFNKFKDSDGKLNKSLHDDVVGLQSLYEATHLRVRGEDFLEEA
LTFTTTHLASAVLANRLSPPLSKQVRHALNQPLRKGLPRLEARHYMSLHQELHGSRNQIL
LSFAKLDFNLLQQLHQKELSDIARWWKELDFASKLPFARDRVIECYFWILGVYFEPKYYF
ARRTLTKVIAMTSIIDDIYDVYGTLEELDLFTRAIERWDISAMDELPEYMKVCYEALLDV
YADTEQQLASEGRLYRIDYAKEAMKRQVGAYHAEAKWFHKNYTPTMDEYMEVALVTSAYS
MLATTSFVGMGDIVTKDSFEWIFSDPKIVKASSVVCRFMDDIVSHKFEQKRGHVASAVEC
YMKQYGATEEQTIIEFRKQVSDAWKDINEECLHPTPLDMPLLMRVLNLTRVIDVLYKHED
CYTHAGTILKDFVASLLIEPVPVPV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaacgtggtcagtgtagcttctcaagcccctcctaccctgaatgcctctact
gatgccggtagtcgacgttcggctaatttccatcccagcatttggggagatcagtttctg
tcttataacaacactatggaaactaacataaatggtgagcaacatgtccaacaactgaag
gaagaagtgaagagaatgctaatggctccgccagttcaaacaagtttgggaaaactggag
ttgattgatgacattcaacgcttgggtgtgtcttaccattttgaatacgaaattgaccaa
actctgcaacaaattcaccacaattttaatggttactgtgatgatgatctgcacacttgt
gctcttcgttttcgcttgctgaggcagcatggttacaatgtttcatgcgatacgttcaac
aagttcaaggacagtgatggaaaattgaacaaatcgcttcacgatgatgtagtgggacta
caaagcttgtatgaagccacacatcttagagtacgaggagaggattttctagaagaagca
ctgaccttcaccaccacacatctagcgtcggcagtgctagcaaaccgtttaagccccccg
ctttcgaaacaagtaaggcatgccttgaatcaaccactccggaagggcttaccgaggcta
gaagcgaggcactacatgtctctccaccaggaactacacggatcacgtaaccaaattttg
ctgagttttgcaaagctggatttcaacctgctccaacaattgcatcagaaagaactaagt
gatattgcaaggtggtggaaggagttggactttgcaagcaagctaccttttgcaagagac
agagtaattgagtgctacttttggattttgggagtctactttgagcccaagtattacttt
gccaggaggacactaaccaaagttattgccatgacatccattatcgatgacatttatgat
gtgtatggcacgcttgaagaactagacctttttactagagcaattgagaggtgggacatc
tccgccatggatgaactaccggagtatatgaaagtctgttacgaggcactgttagatgtc
tatgctgatacagaacaacagcttgcaagcgagggaagattatatcgtatcgattacgca
aaagaagcgatgaagagacaagttggggcgtaccatgctgaagcaaaatggtttcacaag
aactacacaccaacaatggatgaatacatggaagtagcccttgtcacttcagcctactca
atgctagcaaccacatcctttgttggaatgggagatatcgttacaaaagactcctttgag
tggatcttcagtgaccctaagattgtaaaggcttcatcagtagtttgcagattcatggat
gacattgtatcccacaagtttgagcaaaagagaggacatgttgcctcggctgtggaatgt
tacatgaaacaatacggtgcgacagaagaacaaaccataattgaatttcgtaaacaagtg
agtgatgcatggaaggacataaatgaagagtgcctccaccctacacctcttgacatgccc
ctcttaatgcgagttctgaatctcacacgcgtgatagatgtattatacaagcatgaagat
tgctacactcatgctggaaccattctcaaagattttgtagcttctctacttatcgaacct
gtgcctgtgcctgtataa
DBGET
integrated database retrieval system