Rosa chinensis (China rose): 112168247
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Entry
112168247 CDS
T06020
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00750
Vitamin B6 metabolism
rcn01100
Metabolic pathways
rcn01240
Biosynthesis of cofactors
Module
rcn_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
112168247
Enzymes [BR:
rcn01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
112168247
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
112168247
NCBI-ProteinID:
XP_024161135
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All DBs
Position
5:75501048..75502363
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AA seq
312 aa
AA seq
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MADSGVVTVYGKGAIYETGSAKKSSYPVKVGLAQMLRGGVIMDVVTPAQARIAEEAGACA
VMALERVPADIRSHGGVARMSDPQLIKEIKRSVTIPVMAKCRIGHFAEAQILEAIGVDYV
DESEVLTVADDDNHINKHDFQVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAV
RHVRSVMGEVRVLRNMDDDEVFTFAKKIAAPYDMVMQTKQMGRLPVVHFAAGGVATPADA
ALMMQLGCDGVFVGSGVFKSGEPARRARAIVQAATHYSDPEVLAEVSCGLGEAMVGINLS
DNNVERYAYRSE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcggagtcgtcaccgtgtacggcaagggcgccatctacgagaccggcagc
gccaagaagtcctcctaccccgtcaaagtgggcctcgcccaaatgctccgcggcggcgtc
atcatggacgtcgtcacccccgcccaggcccgcatcgccgaggaagccggcgcctgcgcc
gtcatggccctcgagcgcgtccccgccgatatccgctcccacggcggcgtcgcccgcatg
tccgaccctcaactcatcaaagagatcaaacgctccgtcaccatccccgtcatggccaag
tgccgcatcggccacttcgccgaggcacagatcctcgaggccatcggagtcgactacgtc
gacgagtcagaggtcctgaccgtcgccgacgacgacaaccacatcaacaagcacgacttc
caggtccctttcgtctgcggctgccgcaacctcggcgaggccctccgccgcatccgggaa
ggcgccgccatgatccggaccaaaggcgaggccggcaccggcaacatcgtcgaggcagtg
agacatgtccggtcggtcatgggcgaggtccgtgtcttgcggaacatggacgacgacgag
gtcttcacgtttgccaagaagatcgcggcgccgtacgacatggtcatgcagacgaagcag
atggggaggctgccggtggtgcactttgccgccggaggggtggcgacgccggcggacgcg
gcgctgatgatgcagttggggtgtgatggggtgtttgtggggtcgggagttttcaagagt
ggggagccagcgcggcgggccagggcgattgtgcaggcggcgacgcattatagtgacccg
gaggtgctggcggaggtgagctgcggattgggggaggccatggtggggattaatctcagt
gacaacaacgtggagaggtatgcttataggtctgagtaa
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