Rosa chinensis (China rose): 112168285
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Entry
112168285 CDS
T06020
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112168285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112168285
Spliceosome [BR:
rcn03041
]
Complex A
Other components
Complex A specific factors
112168285
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Ras
Motif
Other DBs
NCBI-GeneID:
112168285
NCBI-ProteinID:
XP_024161172
LinkDB
All DBs
Position
5:complement(87509275..87514044)
Genome browser
AA seq
742 aa
AA seq
DB search
MSAKVDTSASGTGGQKVSKFAAKSGFVIPKNKLSGSLVPIFRGDKNVGASDHGGGESKKQ
VQRKTKWGADLTQDASVRKGRALAYQTRVDQITQQLKSGISEFGNNENVPSPSQDPDHIS
STYQVDKEGAEQLELEKREAIGEILKLNPNYKAPADYKPLLKEATVPIPVNEYPTYNILG
LIYGPEGDNQKQLEKETGAKIQVYGTKAETGEKAEIKQYAGSEIQAEYEKLYVHVSADTF
EKVDAAVAVIELLVTSVSGNLSAVAKTALGDNNAQVPSQGQDSTTTDMVPTTMGDQGPVQ
PATGPTQTPPHVQFQYPGPFFSTGQPGSPMNLPGFTPMNSQRPILNNAAHPSTSPFNSTN
LPSLFGPPPALFPQTQHLPPAVLQHTYMPQTSPGSLGAPRNFSMMASQPSSVQTHVSAPV
TFLGNRPPTGQSNHPLESIPDWQLTPAGSSAGWSRPPASAGFSNNMHMAPNPLNHLNAAP
TFTAVPQPQVGLPSTLPMPALAQPKPYMSPMSGSTPAPSPGIVTSLHPPQPPRVPSSVSG
NVPNFSPIKPLTTPSPGDFTFQPHRPQNPTFQAVPQQSNQFSVHNAHPAGPMVRPQVPSL
QLPVRQMTPQPGNQVLSRPQVGDQISQPSAHINAVQFARNSTAISVPPRLATFPDINPVA
PRTSLLPMRQGNFNQAHQMPNLPSPLPPRPRGHIQIQHSYPAQLAPNQQFISNPFASGKS
SNPGGHQLYDPFSPTSDSTARR
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaggtcgatacgtctgcatcgggaactggtggccaaaaggtctccaagttt
gctgctaagtctggatttgttataccaaaaaacaagttatcaggttcactcgtgcccatc
tttcggggagacaaaaatgttggagccagtgatcatggtggtggagaaagtaagaaacag
gttcagaggaaaacgaaatggggtgctgatctgactcaagatgcttctgttagaaaggga
agagcattagcttatcagactcgggtggatcaaattacacaacagctgaaatctggaata
tcagagtttggaaacaatgagaacgtgccatcaccatctcaggatccagaccacatatcc
tctacatatcaagttgacaaggagggtgcagaacaattggaactggaaaagcgggaagcc
ataggtgaaatactaaagttgaatccaaattacaaggctccagctgattataaacctttg
ttgaaagaggcaacagttcctattcctgtcaatgaatacccaacatacaatattcttggt
ctgatatatgggcctgaaggtgataatcagaagcaattagagaaggaaacaggagctaag
attcaagtctatggtaccaaagcagagacgggagagaaggctgaaataaaacaatatgct
gggagtgaaatccaggctgaatatgaaaagttatatgttcatgtatcagctgacacattt
gagaaagtagatgcagctgttgctgtaatcgaactactagtcacctctgtatctggaaat
ctgtcggctgttgccaaaacagctttgggtgataataatgctcaagttcctagtcaaggc
caggacagtaccaccacagatatggttccaactactatgggagaccaaggaccggtgcaa
ccagcgacaggacctacacaaactccacctcatgtgcagtttcagtaccctggtccattt
ttctccacgggccaacctggcagtccaatgaatctaccgggcttcacaccaatgaattct
caaaggcctattctcaacaatgctgcccatccatcaacatcacctttcaactcgacaaac
ctgccgtcattatttgggcctccaccagctctttttccccagacacaacacctaccacca
gcggttttgcagcatacatatatgcctcagaccagtcctggttctcttggcgcaccaaga
aacttctctatgatggcttcccagccatcatcagttcaaactcatgtttcagctccagtt
acattcttgggaaatcgacccccaacaggccaaagtaatcatccccttgaatcaatacct
gactggcaactgacacctgctggaagctctgctggatggagcagaccaccggcatctgcg
ggtttcagtaataatatgcacatggcacctaatcctctaaatcatctcaatgcagctcca
acttttactgctgtgccacaacctcaagttggccttccttctactttaccaatgccagca
cttgctcaacccaaaccatatatgagccctatgtcaggttccactccagctccttcaccg
ggcatagttacatctttacatccacctcagccaccaagagtccctagttctgtttcggga
aatgtaccaaatttcagtcctataaaaccactgacaactccaagtcctggtgatttcact
ttccagcctcaccgaccacaaaatccaacctttcaagcagttccccaacaaagcaatcag
ttttcagttcacaatgctcacccagctggaccaatggtgcgaccacaggtaccatctttg
cagttgcctgtgcgacagatgactcctcagccaggcaatcaggtgttatcaaggccacag
gttggtgaccagattagtcaaccttcagctcatataaatgctgtccagtttgctagaaat
tcaactgccatttcagttcctcccagacttgcaacatttccggacatcaatcctgttgca
cctagaacgtcactcctgccaatgagacaggggaactttaatcaagctcaccaaatgccc
aatttgcccagtcctttgcctccaaggccacgaggtcatattcaaattcagcacagttat
cctgctcaattggccccaaatcaacagttcatcagcaatccatttgcatctggtaagtcg
tctaatcctggaggacaccaactttatgatccattctcgcccacttctgactctacagca
aggaggtaa
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