Rosa chinensis (China rose): 112168326
Help
Entry
112168326 CDS
T06020
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112168326
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112168326
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112168326
Enzymes [BR:
rcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
112168326
Amino acid related enzymes [BR:
rcn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
112168326
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112168326
Prokaryotic type
Other AARSs
112168326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
112168326
NCBI-ProteinID:
XP_024161217
LinkDB
All DBs
Position
5:89536570..89541204
Genome browser
AA seq
582 aa
AA seq
DB search
MDAVRLWSLSSQPLKHLIRTTTTRLVIRCCSSTTTATNPGGRAPKAGGRNRRLSTSTSTS
DRDAVRAIRLKKVEELRSKGLEPYGYGWERTHSANQLQDIYRHLGNGEESKPDKDGVSIA
GRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLAGDQFDQLKSLVDIGDIVGANGSIKRT
EKGELSVYVNSFAILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRKRAKVV
SEIRKTVESFGFIEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGG
FEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNMTEEIVTRCALAVHGKLTL
DYQGVEIHLERPWRRETMHNLVKEATGITFNELGNDLQVAKEVTLKNLGADLDYKHKSSI
EACSSVGHLLNEVFEIIVEPKLVQPTFVLDYPIEISPLAKPHRRHVGLTERFELFVCGRE
LANAFSELTDPMDQRGRLEEQVRQHNEKRAAAISEIGGAEDKREENDESYEVTLDDDFLT
ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggtgaggctatggagcctgtcctcgcagccattgaagcacctcattcgcacc
accaccactagacttgtcatccgctgctgctcttcaaccacaaccgccaccaaccccggc
ggtcgtgctcccaaagccggcggccgcaaccgccgcttatccacatcaacctccacctcc
gacagagacgctgttcgagccattcgcttaaagaaggtagaagagttgaggagcaaaggt
ttggagccatatggttatgggtgggaaaggactcattctgctaatcagctgcaagatata
tacaggcatttagggaatggtgaagagtccaaacccgacaaagatggtgtctcaattgct
ggcagaattgtggctcgcagagcttttggaaagcttgcatttttgacactcagggacgat
tccggaactattcagctctactgtgagaaggaacggcttgcaggtgatcaatttgaccag
ttaaagtcccttgttgatattggtgatatagttggtgctaatggatccatcaagcggaca
gagaaaggggagctgtctgtttatgtaaattcctttgcaattcttacaaaatctctactc
ccactgccagacaaatatcatggtctaacagatgtggacaagcgctaccgtcaacggtat
gtagatatgattgcaaatcctgaggtagctgatgtattccggaaaagagcaaaggttgta
tcagagatacgcaagacagttgaatctttcgggtttatcgaagttgaaactccagttctg
cagggagcagctggtggggcagaggctaggccatttgttacataccataattcacttgga
agggacctgtacttgagaatagcgaccgagctccacttaaagagaatgctggttgggggg
tttgagaaggtgtacgagattgggcgaatattcaggaatgaaggcatttcaactcgtcat
aatcctgagttcactactatagagatgtatgaagcatattcagactatgaaagcatgatg
aacatgacagaggaaattgttacacgatgtgcacttgcagttcatgggaagcttaccctt
gattaccagggggtggagatacatcttgagcgaccttggaggagggaaaccatgcacaat
cttgtaaaagaagccactgggattactttcaatgagttaggcaatgatcttcaagttgct
aaagaagttactctgaagaacctaggagctgaccttgattacaaacacaaatcttctatt
gaagcatgctcatctgttggccaccttcttaatgaggtttttgagattattgttgaacca
aagcttgtgcaacccacatttgttttagactatcctattgagatatctcctctggccaag
ccacatcggaggcatgtagggttgactgagaggtttgagctttttgtatgtggtcgtgag
ctggccaatgctttttctgaattgaccgatcctatggatcagagagggcgactagaagag
caagtaaggcagcacaatgagaagagagcagcagctatttcagaaataggtggtgcagaa
gataaaagagaggaaaatgatgagtcatatgaagtgactcttgatgatgatttccttaca
gctttggaatatgggatgcctccagcttcaggaatgggacttggaattgataggctagtc
atgcttttaacgaattccgccagcatcagagatgtaattgccttcccagtgctaaaaatc
cagcaatag
DBGET
integrated database retrieval system
