Rosa chinensis (China rose): 112168379
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Entry
112168379 CDS
T06020
Name
(RefSeq) nucleolar protein dao-5 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03030
DNA replication
rcn03410
Base excision repair
rcn03420
Nucleotide excision repair
rcn03430
Mismatch repair
rcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112168379
03410 Base excision repair
112168379
03420 Nucleotide excision repair
112168379
03430 Mismatch repair
112168379
03440 Homologous recombination
112168379
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112168379
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcn03032
]
112168379
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112168379
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112168379
DNA replication proteins [BR:
rcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
112168379
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
112168379
MMR (mismatch excision repair)
DNA polymerase delta complex
112168379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
112168379
NCBI-ProteinID:
XP_024161269
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All DBs
Position
5:24100566..24105446
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AA seq
570 aa
AA seq
DB search
MAQIETQGILQDIETLVSDQLQVVSYKWLSRNYLVSSNDAKRLLQEFVENHGNSLEVVYT
LSGQLKNNPVSYHVRLVSGPELAEAKEEFDGNCSVGVYSVQPCIPKDPATIWNAEFVQAE
ELHTQAPTVENCLRDNRFCGILNSFVLRNVEGTPLSTAGPQLKTKLASEPSKINLAHQDS
VILKQQQNKGEQSSPKVGLPAPNVVKDVKSESNGIGVTHQPNKHPADKEKVAPLPANKKK
VQSDKSSSASGGSLANLWGRASVKSKSNSTAENSNLIPTHTGASAEAQICAREAEAGVIS
DDDDQDVNFKRASGSEVTRKRRVVFDFSDEDECEDAVNLASPEYPKGKSCQELKESSKTL
VALKTNLNFDEQVEDKPEVKEEISVDGKSDPPCREDSTVVSKESNSGIILTEKTDRSVPE
KDVNKMDKLATAAKTQIDAGIILTEKKRNSVPEKGVNKMDKLTNGASRSPQRRKILKTRI
DERGREVTEVIWEGKETEAKKADSSATMKADSSTTKKADNTVTSVTNRPAAAQKSVANTG
PKNQTAKAGGKKAVNKDPKQGNILSFFKKV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaatcgaaacccagggcatactccaggacatcgaaaccctcgtctccgatcag
cttcaagtggtttcgtacaaatggctgagtcggaattacttggtgtcgtccaatgatgca
aagaggttgctccaggagtttgtggaaaaccatggaaacagtttggaagtggtatatact
ttgtctggccagttgaagaacaatcctgtgagctaccatgtaaggctcgtttcggggcct
gaacttgcagaagcaaaagaagaatttgatggcaactgctccgttggggtttacagtgtg
caaccttgcattccaaaggatccagctacaatttggaatgcagaatttgtacaagcagag
gagctccatacgcaggctccaacagttgaaaattgcttgagagataacaggttctgcggc
attctcaattcctttgttttgcgtaatgtagagggaacaccattgagcactgcaggtcca
caactgaagaccaaattagcttcagagccatcaaaaattaatttagctcatcaagatagt
gtgattttaaaacagcaacagaataaaggagaacaatctagtccgaaagttggtttgccg
gctcccaatgtggtaaaagatgtcaaaagtgaaagcaatggcataggagttactcatcag
cctaacaaacatcctgcagacaaagagaaagttgctcctcttcctgctaacaaaaagaag
gtccagagtgataaaagctcttctgcttctggaggttcattggcaaatttgtggggtcgt
gcatctgtgaaatccaagtcaaattctacagccgaaaatagtaatttgattcctacgcat
actggagcaagtgcagaggctcaaatttgtgctagagaagcagaagctggtgtcatcagc
gacgatgatgatcaagatgttaattttaagagagcttccggttctgaagtcactaggaaa
cggagggttgtctttgatttctccgatgaagacgaatgtgaagatgcagtcaatttagca
tccccagagtatccaaaaggaaaatcatgtcaagagctcaaagaaagtagcaaaactttg
gttgcacttaaaaccaatttgaactttgacgagcaggtagaagataaaccagaggtcaag
gaagagatatcagttgacggaaaatctgacccaccttgcagagaagattctactgttgtc
agcaaggaaagtaattctgggattatcctgacagagaaaacagacagatctgttcctgaa
aaagatgtgaacaaaatggataagctggccactgctgctaaaacacagatagatgctggg
attatcctaactgagaaaaaacgtaactctgtgcctgaaaaaggtgtgaacaaaatggat
aaactgaccaacggtgcatcaagatctcctcaaagaagaaaaattttgaagacacggatt
gatgaacgtggaagagaagtaactgaggtaatatgggagggcaaggagacagaagcaaag
aaagctgacagcagtgcaacaatgaaagctgacagcagtacaacaaagaaagctgataat
acagttaccagtgttacgaacaggcctgccgcagctcagaagtcagtggcgaacactggg
ccgaaaaatcaaactgccaaagcaggaggcaagaaagcagtaaacaaggatcctaagcaa
ggaaatattctttcattcttcaagaaggtctaa
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