Rosa chinensis (China rose): 112168381
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Entry
112168381 CDS
T06020
Name
(RefSeq) uncharacterized protein LOC112168381
KO
K03504
DNA polymerase delta subunit 3
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03030
DNA replication
rcn03410
Base excision repair
rcn03420
Nucleotide excision repair
rcn03430
Mismatch repair
rcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112168381
03410 Base excision repair
112168381
03420 Nucleotide excision repair
112168381
03430 Mismatch repair
112168381
03440 Homologous recombination
112168381
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112168381
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcn03032
]
112168381
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112168381
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112168381
DNA replication proteins [BR:
rcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
112168381
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
112168381
MMR (mismatch excision repair)
DNA polymerase delta complex
112168381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
112168381
NCBI-ProteinID:
XP_024161271
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Position
5:23928316..23934306
Genome browser
AA seq
478 aa
AA seq
DB search
MACNGSSSAMLRSHKDNLCHPLSYDLMENHKFAWHNLSMPEHLRWFCGILNSFVLRNVEG
TPLSTAGPQLKTKLASEPSKINLAHQDSVILKQQQNKGEQSSPKVGLPAPNVVNDVKSES
NGIGVTHQPNKHPADKEKVAPLPANKKKVQSDKSSSASGGSLANLWGRASVKSKSNSTAE
NSNLIPTHTGASAEAQICAREAEPGVISDDDDQDVNFKRASGSEVTRKRRVVFDFSDEDE
CEDAVNLASPEYPKGKSCQELKESSKTLVPLKTNLNFDEQVEDKPEVKEEISVDGKSDPP
CREDSTVVSKESNSGIILTEKTDRSVPEKDVNKMDKLATAAKTQIDAGIILTEKKRNSVP
EKDVNKMDKLTNGASRSPQRRKFLKTRIDERGREVTEVIWEGKETEAKKADSSATMKADS
STTKKADNTVTSVTNRPAAAQKSVANTGPKNQTAKAGGKKAVNKDPKQGNILSFFKKV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtaatggttcaagtagcgcaatgcttcgaagtcataaagataatctttgccac
ccattgtcttatgatcttatggaaaatcacaaatttgcgtggcacaatttgagtatgccg
gagcatcttcgatggttctgcggcattctcaattcctttgttttgcgtaatgtagaggga
acaccattgagcactgcaggtccacaactgaagaccaaattagcttcagagccatcaaaa
attaatttagctcatcaagatagtgtgattttaaaacagcaacagaataaaggagaacaa
tctagtccgaaagttggtttgccggctcccaatgtggtaaacgatgtcaaaagtgaaagc
aatggcataggagttactcatcagcctaacaaacatcctgcagacaaagagaaagttgct
cctcttcctgctaacaaaaagaaggtccagagtgataaaagctcttctgcttctggaggt
tcattggcaaatttgtggggtcgtgcatctgtgaaatccaagtcaaattctacagccgaa
aatagtaatttgattcctacgcatactggagcaagtgcagaggctcaaatttgtgctaga
gaagcagaacctggtgtcatcagcgacgatgatgatcaagatgttaattttaagagagct
tccggttctgaagtcactaggaaacggagggttgtctttgatttctccgatgaagacgaa
tgtgaagatgcagtcaatttagcatcaccagagtatccaaaaggaaaatcatgtcaagag
ctcaaagaaagtagcaaaactttggttccacttaaaaccaatttgaactttgacgagcag
gtagaagataaaccagaggtcaaggaagagatatcagttgacggaaaatctgacccacct
tgcagagaagattctactgttgtcagcaaggaaagtaattctgggattatcctgacagag
aaaacagacagatctgttcctgaaaaagatgtgaacaaaatggataagctggccactgct
gctaaaacacagatagatgctgggattatcctaactgagaaaaaacgtaactctgtgcct
gaaaaagatgtgaacaaaatggataaactgaccaacggtgcatcaagatctccgcaaaga
agaaaatttttgaagacgcggattgatgaacgtggaagagaagtaactgaggtaatatgg
gagggcaaggagacagaagcaaagaaagctgacagcagtgcaaccatgaaagctgacagc
agtacaacaaagaaagctgataatacagttaccagtgttacgaacaggcctgccgcagct
cagaagtcagtggcgaacactgggccgaaaaatcaaactgccaaagcaggaggcaagaaa
gcagtaaacaaggatcctaagcaaggaaatattctttcattcttcaagaaggtctaa
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