Rosa chinensis (China rose): 112168780
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Entry
112168780 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: RING-H2 finger protein ATL65
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112168780
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112168780
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112168780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
112168780
NCBI-ProteinID:
XP_024161466
LinkDB
All DBs
Position
6:complement(16684417..16686682)
Genome browser
AA seq
401 aa
AA seq
DB search
MVPAASPSPSPAPSPTPTFSXPLTNPNDTLLHASSSSYPPSKLPIDFSPPLIAMVVVVAT
AFLIVTYSRLISRHVIPPIIRFSRHCRRRRRRSYLPSSIGDLDSPPYDSSFDPTDGFHVF
SPYGLDESVIKTIPLSLYTAKTGLRSKDCAVCLIEFEDDEYVRTLPVCSHAFHVDCIDMW
LRSHANCPLCRAGIFRPESPFIPLMAARIRPSLDDALLRSMALEPLAETPPRETESTAEI
TPCAEEQSPRRTFNYWEDRINGGDFVLKRSYSFGFERSSASERMMVTEPTTASPWRYRRG
GSFWSKRPSPFGSLTKPRVFSFRSHRGMNMKSPFFRRKGFFPLSESSARFSTGGGSSRRT
KSMTSPMFMRSSALTAAAFSSSRLRCGDPEALLSPERFNRR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgccgcgtccccatccccttcccctgcaccctcccccaccccaacattctcc
naccccctcacaaaccccaacgacactctcctccatgcatcatcctcatcatatccgccg
tccaagctccccatcgacttctccccgccgctcatcgccatggtcgtcgtcgtcgccacc
gctttcttaatcgtcacctactcccgtctcatctcccgccacgtcatccccccgatcatc
cgattctcccgccactgtcgccgccgtcgccgccgctcctacctcccctcctccatcggc
gacctcgactccccgccctacgactcgtcgttcgaccccacggacggcttccatgtcttc
tccccatacggcctcgacgagtcggtgatcaagaccataccgctgtcgctatacaccgcc
aagaccggcctccggagcaaggactgcgccgtctgcttgatcgagttcgaagacgacgag
tacgtccggacgcttccggtttgttcccacgcctttcacgtcgactgcatcgacatgtgg
ctcaggtcccacgccaactgtccgctctgccgcgccggaatattccgtcccgagtctccc
ttcattcccttaatggccgccagaatccggccgagcctcgacgacgcgctccttcgcagc
atggctctcgagcctctcgcggaaactccgccgcgagagacggagtccacggcggagata
actccctgcgcggaggagcagtcgccgcggaggacgttcaattactgggaggaccgaatc
aacggcggagatttcgtcctcaagcggtcgtactcgttcggattcgagcggagctccgct
tcggagcggatgatggtgacggagccgacgacggcgtcgccgtggcgttaccggagaggc
ggaagcttctggagcaagaggccgtcgccgttcggatcgctgacgaagccccgggtcttc
tcgttccggtcccaccgaggcatgaacatgaagtcgcctttcttccggcgaaaaggcttc
ttcccgctgtcggagtcaagcgcgagattctccaccggcggcggctcttcccggcggacg
aagtcgatgacgagcccaatgttcatgaggtcgtcggcgttgaccgcggcggcgttctcg
tcaagccggctccggtgcggcgaccccgaggcgctgttgtcgccggagaggtttaacaga
agatag
DBGET
integrated database retrieval system
