Rosa chinensis (China rose): 112168795
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Entry
112168795 CDS
T06020
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112168795
Spliceosome [BR:
rcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112168795
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
ARM_TT21_N
WRNPLPNID
AEP1
Motif
Other DBs
NCBI-GeneID:
112168795
NCBI-ProteinID:
XP_024161482
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All DBs
Position
6:complement(14509988..14512908)
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AA seq
801 aa
AA seq
DB search
MLLSTAPDLTLSTVTLTHSSSSSSSPLPLFRSLTLSPTPHRRFSSPPIISALQFRRPHAL
PASTALLQHLPPEQDDQDWDSSNVAQSDAFDFERCFASTDLKHLASPNLEVRELDELPEQ
WRRSKLAWLCKELPSHKSGTLIRILNAQKKWMRQEDATYVAVHCMRIRENEAGFRVYKWM
MQHKWYRFDFALATKLADYMGKERKFAKCREIFDDIIKQGRVPSESTFHILVVAYLSAPG
EGCLEEACSVYNRMIQLGGYQPRLSLHNSLFKAIVSKPGSSAKPYLKQAEFIFHNLLTTG
LEIHKDIYSGLIWLHSYQDTVDTERMASLRKEMQEAGIEEGKEVLVSILRACSKMGDVEE
AENTWLRLLRLNVGLPSQAFVYKMEVYAKVGEPKKSLEIFREMQEHLGSANVVAYHKVIE
IVCKAKEIELAESLMADFINTGLKPSMPAYIDLMNMYFNLSLYDKVESAFSQCLEICRPS
RTVYCIYLDSLVKVRNLDKAEEIFDYMQSNGAIGINVRSCNTILSGYLSAGDDFKAEKIY
GLMCQKKYDVDPPLMEIINSFLSLRKKQVKRHISMTLSKEQREILVGLLLGGLQIESDDD
RKNHMIRFEFSENSSAHSVLRGHIYDQYHEWLHPSCKRSENTEHIPYKFSSISHSYFGFY
ADQFWPNGRRMIPKLVHRWLSPCVLAYWYMYGGYRTASGDILLKIKGSEESVQKIVRTLK
AMSLECKVKRKGRVFWIGFLGSNSTLFWKLTEPYILDDLKHLLKSDGESSGNNTVENENI
NFASGSDTDENASDNSDDDRN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgagcacagctcctgacctcaccctttccactgtcactctaacccactcctcc
tcctcctcctcctctcccctccccctttttcgctccctcactctctcccccactccccac
cgccgattctcctccccacccatcatctccgccctccaattccgccgccctcacgccctc
cccgcctccaccgctctcctccaacacctcccgcccgagcaagacgaccaggattgggat
tccagcaatgtcgcccagagcgacgctttcgatttcgagaggtgcttcgcctccaccgac
ctcaagcacctcgcctcgcccaacctcgaggttcgcgagctcgatgagctgccggagcag
tggcggaggtccaagctcgcttggctctgtaaggagctgccgtcgcataagtccgggact
ttgattcggattctcaatgcccagaagaagtggatgaggcaagaggacgccacctatgtc
gccgtgcattgtatgcgaattcgcgagaacgaagccggattccgggtgtataaatggatg
atgcaacacaagtggtaccgatttgattttgctcttgctaccaagttggcggattacatg
gggaaagagcggaaatttgcgaaatgtagggagatttttgatgatataattaagcagggg
cgtgtgcctagtgagtctacatttcatatattggttgttgcataccttagtgctccgggt
gaaggttgcttggaagaagcgtgtagtgtttacaatcgaatgattcagctcggaggttac
cagccgcggcttagcttgcacaattctctgtttaaggctattgtgagcaaaccagggagc
tctgcgaaaccttacctcaaacaggccgagtttatatttcataatttgttaacaactgga
cttgagattcacaaggacatttacagtggcttgatttggttacatagttatcaggatact
gtcgatacagagaggatggcatcgttgaggaaggagatgcaagaagcagggattgaagag
ggcaaagaagtgcttgtgtctatcttgagagcgtgctcaaagatgggggatgtggaggaa
gcagagaacacttggctcagacttctccgtcttaatgtaggtcttccgtcacaggcgttt
gtttataagatggaagtgtatgcaaaggttggagaacccaagaagtctttggagatattc
agggagatgcaggagcacttgggttcagccaatgttgtggcatatcataaagtcatagaa
attgtctgtaaagctaaagaaattgaacttgcagaatccctcatggcagatttcatcaac
actggtttgaagccttccatgccagcttatatagatctaatgaacatgtacttcaacttg
agcttatatgacaaagtggaatcagccttctcccaatgccttgagatatgtagacctagc
agaacggtttactgtatatacttggattctttggtgaaagttcgtaatcttgataaagct
gaggagatatttgactacatgcagagtaatggggcaataggtattaatgtccgttcctgc
aataccatattaagtggatacttgtcagctggagatgatttcaaggcagagaaaatatat
ggtctgatgtgtcagaagaaatatgatgttgatcctccattgatggaaataatcaactct
ttcttgagtttgagaaagaaacaggttaagagacatataagcatgacgctgagcaaagaa
caaagagagatattagtaggtctactgctgggtggtttgcagatcgaatcagatgatgac
agaaagaatcacatgatccgttttgagttcagtgagaattctagcgcacattctgttttg
aggggacatatatatgatcaataccatgaatggctccatccttcgtgcaagcgcagtgag
aatactgagcacataccatataaattttccagcatctcacattcttattttggtttctat
gccgaccagttttggcccaatggccggcggatgattcccaaactagtccaccgatggctc
tcaccatgtgttcttgcatactggtatatgtatgggggctacaggactgcatcgggagac
atattgctgaaaataaagggaagtgaggagagtgttcagaagattgtcagaaccttgaag
gcaatgtctctggagtgcaaggtgaagaggaaggggagagtgttttggataggtttcctg
ggaagtaattctacactgttctggaaactaacggaaccttacattctagatgacttgaaa
catcttctaaaatcggatggggaaagctcagggaacaatacagttgaaaatgaaaacatc
aacttcgctagtgggtctgacaccgatgagaatgcctctgataatagtgatgatgatagg
aattaa
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