Rosa chinensis (China rose): 112168872
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Entry
112168872 CDS
T06020
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112168872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112168872
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
112168872
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112168872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
HHH_2
HHH_5
HHH_8
Motif
Other DBs
NCBI-GeneID:
112168872
NCBI-ProteinID:
XP_024161563
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All DBs
Position
6:complement(58053608..58055571)
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AA seq
378 aa
AA seq
DB search
MLSLKLRPLSTMKKRQIPIQSPPSTPPTPQTLSSKSKRPKTLNLKSPKWAPLNLTQSELS
LPLTFPTGQTFRWRQTGPLQYTGVVGSHLVSLQHLQNGDVSYCLHQSATSESNAESALLD
FLNMGISLAGIWEVFSASDSRFAELATHLGGARVLRQDPLECLIQFLCSSNNNIQRITKM
VDFVSSLGNHLGSVGGFEFHEFPSLDRLAMVSEQELREAGFGYRAKYLTGTVKALQSKPG
GGEEWLLSLRKLELEEVIDALTTLPGVGPKVAACIALFSLDQHNAIPVDTHVWKIATRYL
IPELAGARLTPKLCGRVAEAFVSKYGKYAGWAQTLLFVAELPSQKALLPPHFSNTKESKS
AKGKGRGVQTVADASNSE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctctcactgaaactgagacctctctcaaccatgaagaagagacagatcccaatccaa
tcgcctccatccacccctccaaccccacaaaccctaagctccaaatccaaaagacccaaa
accctcaacctcaaatcccccaaatgggccccactcaacctcacccagtccgagctctcc
ctgcccctcaccttccccaccggccaaaccttccggtggagacaaaccggccctcttcag
tacaccggcgttgttgggtcccacctggtctccctccagcacctccaaaacggcgacgtt
tcctactgccttcaccaatccgccacttccgagtccaatgccgagtcggctctgctcgat
tttctcaacatgggtatttccctggccggaatttgggaggttttctcggcttccgattcc
aggtttgccgagctcgccacccatttgggcggcgctagagttctcaggcaggacccactt
gagtgtttgattcagttcctgtgttcttcaaataacaacattcagagaattaccaaaatg
gtggactttgtgtcttcactggggaaccatttggggtctgtaggaggttttgagttccat
gaatttccatccttggatcgcttggcaatggtgtcggaacaagagctcagagaggccggt
ttcggttatagggctaagtacttaactggcactgtgaaggcattgcagtcgaaacctggt
ggaggtgaagagtggcttttgtctcttcggaaacttgaactcgaagaggtgattgacgct
cttaccacattgcctggagttggtcccaaggtggcagcatgtatagctcttttttcgctt
gatcaacacaatgccattcctgttgatacacacgtgtggaagattgctacaagatacctc
attcctgagctagcaggggctcgtctgacaccgaagctctgtggccgcgtggcggaggca
tttgtgagtaaatatgggaaatatgctggatgggctcaaactctgctgtttgttgctgaa
ttgccttcacaaaaagccctcctaccaccacatttttcaaataccaaggagagtaaatct
gcaaaaggaaagggccgtggagtgcagactgtagcggatgcctcaaacagtgaataa
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