KEGG   Rosa chinensis (China rose): 112168874
Entry
112168874         CDS       T06020                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03030  DNA replication
rcn03410  Base excision repair
rcn03420  Nucleotide excision repair
rcn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112168874
   03410 Base excision repair
    112168874
   03420 Nucleotide excision repair
    112168874
   03430 Mismatch repair
    112168874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rcn03032]
    112168874
   03036 Chromosome and associated proteins [BR:rcn03036]
    112168874
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112168874
DNA replication proteins [BR:rcn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    112168874
  DNA Replication Termination Factors
   ELG1-RFC complex
    112168874
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    112168874
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     112168874
  Check point factors
   HRAD17(Rad24)-RFC complex
    112168874
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_16 AAA_assoc_2 AAA_11 AAA_24 AAA_30 AAA_19 AAA_5 ATPase_2 AAA_14 DNAX_ATPase_lid DUF815 RuvB_N SLFN-g3_helicase AAA_7 ResIII bpMoxR nSTAND3 AAA_3 TniB AAA_28 AAA_25 Mg_chelatase TIP49 AAA_18
Other DBs
NCBI-GeneID: 112168874
NCBI-ProteinID: XP_024161565
LinkDB
Position
6:58001229..58004765
AA seq 365 aa
MAELTTPMDIDGDDINPSLKPNNKGKNVAVSGPSHGKATPWVEKYRPQSLADVAAHRDIV
DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAHYHNMILELNASDDRGIDVVR
QQIQDFASTQSFSFGIDNAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLICN
HVNKIIPALQSRCTRFRFAPLDSFHVTERLKHVIEAEGLDVSESGLAAVVRLSNGDMRKA
LNILQSTHMASQNITEEAVYLCTGNPLPKDIEQISHWLLNESFTESFKRISDMKTRKGLA
LVDIVREVTMFVFKIKMPPDVRVLLINDLADIEYRLSFGCNDKLQLGSIIASFTKARSAL
VAAAK
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggcagagctaaccactcccatggacatcgacggcgacgatatcaacccctctctaaaa
cccaacaacaagggcaaaaacgtcgccgtttccggcccctcccacggcaaagccactccc
tgggtcgagaagtaccgccctcagtccctcgccgacgtcgccgcccaccgcgacattgtc
gacaccattgataggctcactagtgagaacagattgccacacctcctactgtatggccct
cctggcactggaaaaacttccacgattctggccgtcgcacgcaagctctatggtgcacat
taccacaatatgattctcgagttgaatgcatcggatgacaggggaatcgatgttgtgagg
caacagatccaggattttgccagcacacagagtttttcgtttgggattgacaatgcaaag
gcatctgtaaagttggtcttactggatgaagcagatgctatgactaaggatgctcagttt
gctttgagacgagtgattgagaaatacacaaagaacaccagattttcactaatctgtaac
catgtcaacaagattattccagctttacagtcaagatgtactcgttttcggtttgctcca
cttgattcttttcatgtaacagagcgactcaaacatgttatagaagctgaagggcttgat
gtgtctgagagtggcttagcagcagttgtacggcttagcaatggtgacatgagaaaggcg
ctgaacattctgcagtcaactcatatggcttcacagaacataacagaagaagcagtatat
ctttgcacaggaaatccattgcctaaggacattgagcaaatatctcactggcttttgaat
gagtcatttacagagagtttcaaacgaatttctgatatgaaaacaagaaagggattggct
ttggtagatatcgtaagagaagtgactatgtttgtttttaagatcaagatgccaccagat
gttcgagttttgttgattaatgatttagctgacatagagtacagattgagctttgggtgc
aacgataaattgcaacttggatcaataattgcttcttttacgaaagctcgctctgcactt
gttgctgctgcaaagtag

DBGET integrated database retrieval system