Rosa chinensis (China rose): 112168933
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Entry
112168933 CDS
T06020
Name
(RefSeq) exopolygalacturonase clone GBGE184
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112168933
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112168933
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
112168933
NCBI-ProteinID:
XP_024161636
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All DBs
Position
6:56726053..56728294
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AA seq
490 aa
AA seq
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MSMGLSSPNMDTARRLEAILLVGLVFLACAANGASRRHLFEVGAPRRSLTDTTNRKVFDV
TAFGAKPEAGDSKGRKMRELPGGGDIDAPLPQLPVAGGGDSGSDDGNDDGSNPDADNDTG
MAFIKTWVAACRGEYKGPAKVLIPKGTFLAGPVVFQGPCTSSKEPIVLEIQGEVKATTDL
SDYSSPEWISFENIDGLIVTGDGVINGQGEKTWNGAGCHSDDCPHSPSNIKFQKVKNALI
EGITSLNSKYFHYHITDSSNVTMDNVHITAPGDSPNTDGCHISNSDNVKVINSIIGTGDD
CVSVGQGARQVTINNVTCGPGHGISVGSLGKYKDEQPVVGVTVTNCTLSNTTNGARIKTW
AGPNRGEARGIIFDNLVLDHVKAPIVIDQHYGEKKSGGDNKNAKDPNSGKQSLYKLSDIH
FRNIKGTSSHNVAVSLSCSATNPCDGVELNNIDIALGGAGTAKKTDVASECYNAKVTTKG
TMNPAAPACQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgggattgagctcgccaaacatggacaccgcaaggagattggaggctattctt
ctcgtaggcttagtttttctcgcttgcgcggccaatggtgcatcccgtcgacatcttttt
gaggttggtgcacctcgtcggagcctcactgatactacgaaccgaaaagtattcgacgtc
acagccttcggtgctaagcccgaagccggcgattcaaaaggacgcaaaatgagagagctt
cccggcggtggagatatagatgctcctctaccacaacttcccgttgctggtggcggcgac
tccggcagcgatgatgggaatgatgacggttcgaatcccgatgctgacaatgatactgga
atggcattcattaaaacgtgggtggccgcatgcaggggagagtacaagggtccagcaaag
gttcttattccaaaaggcacatttttggccggacctgttgtgttccaagggccatgcacc
agctccaaggagccaatcgttttggaaattcagggagaagtgaaagccaccaccgatttg
agtgattattcctctcctgaatggatctcgttcgaaaatattgacggtttgattgtcacc
ggtgatggagttatcaatggccaaggcgagaaaacatggaacggtgccggctgccatagc
gacgactgccctcattccccatccaacataaaattccagaaggttaagaatgcacttatc
gaggggatcacatccttgaacagcaagtactttcattaccacatcaccgactccagcaac
gttaccatggacaatgtgcacattactgcccctggcgatagccctaacacagacggatgc
cacatcagtaattccgacaacgtcaaagtgatcaacagcatcatcggaaccggggacgac
tgcgtttcagtcggccagggcgcccgccaagttaccatcaacaacgttacttgcggccct
ggccatggcatcagtgttggaagtcttggtaagtacaaggacgaacagcccgtagtcggt
gtcaccgtgaccaattgcacattgtcgaacacaaccaacggcgccagaatcaaaacttgg
gccgggccgaacagaggagaagcaagaggaattatattcgataacctcgtcttggaccat
gtgaaagccccaattgtcatcgatcaacactatggagaaaagaaaagtgggggagacaat
aaaaatgcgaaggatccaaactccggaaagcaatccctatataagctcagtgatattcac
ttcagaaacattaagggcacctcgtcgcacaacgttgccgtgtcactatcatgcagcgct
acaaacccttgcgacggggttgaattgaataacatcgacattgccttaggaggagccggc
accgccaaaaaaacagacgttgcatcggaatgttacaacgcaaaggttactactaagggc
acaatgaatccagcagcaccagcctgccaataa
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