Rosa chinensis (China rose): 112168943
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Entry
112168943 CDS
T06020
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112168943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112168943
Spliceosome [BR:
rcn03041
]
Complex C
Other components
Step II factors
112168943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
SpoOE-like
Motif
Other DBs
NCBI-GeneID:
112168943
NCBI-ProteinID:
XP_024161643
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All DBs
Position
6:complement(53803064..53804988)
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AA seq
420 aa
AA seq
DB search
MEDLKKEIEAKRQRLAEAAATGTGSKRYFNRAEMEKKQIQKKREDEKRELEAKAKSKRQS
ATASSSAAATGGDSTSKSNPNAAATTTTTSAAPSASKALTDEQKIDLINIPKPEVIRRLR
ILKQPITLFGEDDDARLDRLKHVLKTGMFEVDSDMTEGQTNDFLRDIAELRKRQKSGIVS
DRKRKNSEVVDGVVEDGEGGVREDELDGDGGSSGADVDRDLKLMKANFDELCDEDKILVF
FKRLLSEWKQELGQMTAADRRAGKKIATLNQCARYLHPLFKFCRKKVLPDDIRRALMVVV
DCCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKY
LQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLQMETDSGSSQVFEERLRLMPAP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaggatctgaagaaagagatagaggccaagcggcagaggctggcggaggcggcggcg
accggcaccggcagcaagcgatatttcaatcgcgccgagatggaaaagaagcaaatccag
aagaagcgggaggatgagaaacgcgaattagaagccaaagccaaatccaagcgccaatcc
gccaccgcctcctcctccgccgccgcaaccggtggtgattcaacttccaaatcaaaccct
aacgccgccgctaccaccaccaccacctccgccgcgccctcggcttctaaagccctaacc
gacgagcagaaaatcgacctgattaatatccccaagccggaagtgatccgccgcctcagg
attctgaagcagccgatcactctcttcggcgaggacgacgacgcccggctcgaccggctg
aagcacgtgttgaagaccggaatgttcgaggtcgactccgacatgacggaggggcagacc
aacgatttcctccgggatatcgccgagctgaggaagcggcagaagtcggggattgtgagc
gaccggaagaggaagaactccgaggtcgtggacggcgtggtggaggacggcgagggtggg
gtgagggaagatgagcttgacggcgacggcgggtcgagcggagctgatgtggatagggac
ttgaagctaatgaaggccaatttcgatgagttgtgcgatgaagataagattttggtgttc
ttcaagaggctgctgagtgaatggaaacaggagctgggtcagatgacggcggctgacagg
cgagctgggaagaaaattgccacattgaatcaatgtgctcgctacttgcatcccttgttc
aagttttgcaggaagaaggttcttccagatgatattcgccgagcgttgatggtggtggtt
gattgctgcatgaagcgagactacctagccgcaatggaccaatacattaagatggcaatt
gggaatgcaccatggccaattggtgtcactatggttggtatccatgaacgttcagctcgc
gagaagatctacaccaacagtgtggctcatattatgaatgatgagacaactcgaaaatac
ttgcagtctgtgaaaagattgatgaccttttgtcagcgacgctacccaactatgccatca
aaagctgttgagttcaacagcttggctaatggtagtgacttgcagtctctgctacaaatg
gagactgactctggcagtagtcaagtctttgaggaaaggcttcggttaatgcctgctcct
tag
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