Rosa chinensis (China rose): 112169218
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Entry
112169218 CDS
T06020
Name
(RefSeq) myosin-16 isoform X1
KO
K10357
myosin V
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112169218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112169218
04131 Membrane trafficking [BR:
rcn04131
]
112169218
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112169218
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rcn04812
]
112169218
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112169218
mRNA cycle factors
P-body specific factors
112169218
Membrane trafficking [BR:
rcn04131
]
Others
Actin-binding proteins
Myosins
112169218
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112169218
Cytoskeleton proteins [BR:
rcn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112169218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
Zeta_toxin
Smac_DIABLO
VGCC_beta4Aa_N
CbiA
ABC_tran
AAA_19
Motif
Other DBs
NCBI-GeneID:
112169218
NCBI-ProteinID:
XP_024161983
LinkDB
All DBs
Position
6:complement(52032479..52043593)
Genome browser
AA seq
1145 aa
AA seq
DB search
MSKPVTIVVGSHVWVENAELIWTDGEVLKINGEEAEIRTSDENTVTAKVSKLHPKDTEIP
AGGVDDMTKLSYLHEPGVLHNLATRYEISEIYTYTGNILIAVNPFQTLSHLYDASMMKKY
SGVPFGELSPHVFAIADAAYREMVNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGNA
AAEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDNRGRISGAAIRTYLLE
RSRVCQISDFERNYHCFYLLCAAPEKEREKYKLVDPRSYHYLNQSSCYELVDIDDAQFYL
STRRAMTVIGISEVEQEAIFRVVAAILHLGNIDFANGEDHDSSVIKDDQSLFHLQMAAEL
LMCNPRALEDALCKRVMITPEEIIKRSLDPLGATVSRDGLAKTIYSQLFNWLVDKINVSI
GQDPSSKCLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNKHVFKTEQEEYTKEEID
WSYIEFVDNKDVLDLIEQKKGGIIALLDEACMFPKSTHETFSTKLYQTFKNNKRFIKPKL
TRSDFTVVHYAGEVQYQSDQFLDKNKDYVVPEHRDLLSASKCPFVEGLFPPVSEEAAKSS
KFSSISSRFRLQLQQLMETLNSTEPHYIRCIKPNNLLKPAVFENVSVIQQLRSGGVLEAV
RIKCAGFPTYRNFSEFLTRFRILAPEVLKIECPENEACKKILEKMGLKDYQIGKTKVFLR
VGQMAVLDAQRTLMHGNSAKVIQTQGRTLVTRKKFVSAQMASICIQSVCRGELARKLYKL
KKQEFAAVKIQKTSRKRLARKDYLRMIFSSVLLQAHLRAMVARDDFKSKRLAAVIIQSGL
RAMAARDDLRYKVEAAVVIQTGLRAIAAHGAYRKRAKSRAAVITQTDLEEPKEKEATKSE
ASKQAKTDLEEAKVEEATKLESSVKDKNGPKEAKGEESTKLESSLKVDEKSVLVESRAAA
IEIDKTSPMIQKLPGPDQDADIIKILTAEVENLKVMLQAEKQRANEFEGRYLEARVSSEQ
GHKKLEETERIVHQLQDSLNRMIYCMSNQVSELKTILCTASKSSSTSGPLVRHEGVDSIS
SNSECSSTDSEFNFPAPVSTSTNISSPGPNSVPLIVQDVSAGEVSGCESKNNEKVRKEGA
FDDFF
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccagtgaccattgttgttggttctcatgtctgggtggagaacgcggaatta
atttggactgatggagaagtactaaagattaatggagaggaagctgagattagaactagc
gatgagaatacggttactgcaaaggtgtcaaagttacacccgaaagatacagaaattcct
gctggtggagttgatgacatgactaagttatcatatttgcatgaacctggagtgcttcac
aatttggcaaccagatatgaaatcagtgaaatttatacttacactggaaacattctcatt
gccgtcaatccatttcaaactctttcacatctgtatgatgcttctatgatgaaaaagtac
agtggagtgccatttggagaacttagcccccatgtttttgcaatagctgatgctgcatac
agggaaatggttaatgagggaaagagcaactctattctggttagcggtgaaagcggagct
ggtaagactgaaacaactaaaatgctaatgcgctaccttgcctacttgggtggcaatgct
gcagctgaaggacggactgttgaacaacaagttttagaatcaaatccagttcttgaagca
tttggtaatgccaagactgttaaaaataacaattccagccgctttgggaagtttgttgag
attcaatttgataatcgtggtagaatatcaggggcagccatcaggacttatctcctagag
agatctcgtgtttgccaaatatctgattttgagcgtaactatcactgtttttatctcctg
tgtgctgctccggagaaggagagagagaaatataagttggtggatcctcgatcatatcac
tatcttaatcaatcaagttgctatgaattggttgatatcgatgatgctcagttttatctc
tctactaggagagccatgactgttattggaataagcgaagtagaacaggaagctattttc
agagttgtggcagcaattcttcatcttggaaatattgattttgccaatggggaagatcat
gattcatccgtcataaaagatgatcaatccctttttcatcttcaaatggcagcagaactt
ctcatgtgtaatcctcgagcactggaagatgcactctgtaagcgtgtaatgattacccca
gaagaaattattaaaagaagtcttgatccacttggtgcaacagttagcagagatggttta
gccaagacaatttattctcaattgttcaactggttggtggataaaatcaatgtctcaatt
gggcaagaccctagctcaaaatgtttgattggggtccttgatatatatggttttgaaagc
ttcaaaactaatagttttgagcagttttgtattaattacacgaatgaaaagctgcaacaa
catttcaacaagcatgtcttcaagacggaacaagaggaatataccaaagaggaaattgac
tggagctacatagaatttgttgataacaaagatgtcctagatctcattgaacagaaaaaa
ggtgggatcattgctctacttgatgaagcctgtatgtttccgaaatcaactcatgaaaca
ttttcaacaaagctttatcagacatttaaaaataataaacgcttcatcaagccaaagctg
acccggtcagatttcaccgttgttcattacgcaggagaagtacaatatcaatccgatcaa
tttttagacaaaaataaagattatgttgttcctgaacatcgagatttgttgagtgcttca
aaatgcccctttgtagagggtcttttccctccggtttctgaggaggcagccaaatcttcg
aagttctcatctatcagttcgcggtttaggctacaactgcaacaattgatggaaactcta
aattctacagagccccactacataagatgtataaagccaaataatctcttaaaacctgca
gtatttgagaatgtcagtgtcatccagcaactacgttctggtggtgttttagaggcagtc
agaataaaatgtgctggattccctacttacaggaatttttcggaatttttaactcgtttt
cgtatcctggcaccagaggtcttgaaaattgagtgtcctgaaaatgaagcctgtaaaaag
attttggagaagatggggcttaaagattatcagatagggaaaacaaaggtttttttaaga
gttggtcagatggctgtgcttgatgcacagagaacactcatgcatggcaactcagcgaag
gtgattcaaacacagggcagaactcttgttactcgtaaaaagtttgttagtgcacagatg
gcttctatttgcatacaatcagtttgtagaggagaattggctcgcaagttatataagctg
aagaaacaggagtttgccgccgttaaaattcagaagacttcacgtaaacgcctggcgaga
aaagattatctcagaatgatcttctcttcagttctcttacaagcacatctacgggcaatg
gttgctcgtgatgattttaaatccaagcgtttggcagcagttattattcagtcaggttta
cgtgcaatggctgctcgtgatgatcttagatataaagtagaagcggcagttgttattcag
acaggtttaagggcaattgctgctcatggtgcctatagaaaaagagcaaaatccagggca
gcagttattactcagactgacttggaagaaccaaaggaaaaagaagcaacaaagtcggag
gcctctaagcaagctaaaactgacttggaagaagcaaaagtagaagaggcaacaaagttg
gagtcctctgtgaaagataagaatggccctaaagaagcaaaaggagaagagtcaacaaag
ttggagtcctctctgaaagttgatgaaaaaagtgtgttggttgagagtcgggctgcagca
atagaaattgacaaaacatcccctatgatccaaaaacttccaggtccagatcaagatgct
gacataattaagattcttactgcagaagtcgaaaatttgaaggtcatgttgcaagcagaa
aaacagagagctaatgagtttgaagggagatatctagaagcccgggtatcaagtgagcaa
ggacataaaaaattagaggagactgaaagaatagtacatcaacttcaggactctttgaac
aggatgatatattgcatgtcgaaccaagtttcggagctcaaaacaatattgtgtactgca
tcaaaatcaagttcaacttctgggcctcttgttagacacgaaggagttgatagcatttcc
agtaactctgaatgttcatccactgactcagaatttaattttccagctccagtttcaact
tcaactaacatttcttccccaggccccaattctgtcccacttatagttcaggacgtttct
gctggagaagtttcaggatgtgaaagtaagaacaatgaaaaggtgaggaaggagggcgct
tttgatgacttcttctga
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