Rosa chinensis (China rose): 112169272
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Entry
112169272 CDS
T06020
Name
(RefSeq) transcription factor MYB3R-1
KO
K09420
transcriptional activator Myb
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112169272
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112169272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF5591
Rap1_C
Motif
Other DBs
NCBI-GeneID:
112169272
NCBI-ProteinID:
XP_024162055
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All DBs
Position
6:64673884..64680087
Genome browser
AA seq
1052 aa
AA seq
DB search
MDGDRTNSTPEGSGGDSIQRARALHGRSSGPTRRSTKGQWTPEEDEILRRAVQSFKGKNW
KKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIVELVKKYGPKKWSTIAQHLP
GRIGKQCRERWHNHLNPGINKEAWTQDEELALIRAHQIYGNKWAELTKFLPGRTDNAIKN
HWNSSVKKKLDSYLKSGLLPDLEGTPHVGHQNQPIISSCSRVQNSGDDSAPRGAEGEEIS
ECSQDSNVAGCFQSGTAMVNVVLHTRDRSHIREVSRLGNDPSSSPASCSEPYYPSMGDAT
FSIPEIPPEIVSSSKFIEQSFSHDAGESMSGDFQFNMQELTNISSLESEQEASGMHTHCM
SSNEIHDVVNFPFQTAGAFPASTSMGNMADGSVKSERMLISDDECCRALFSEAINQGYFS
RDFTNGLNMVDLIACTDSLLLQSSSNLQMSETGRSSQLYCPLNSDVVGTSCSQPVSAHNG
PLIFAGEANNLFRVQEQEYVTNSEDGFVYTNDTARSPSNVVGNETRMQEQSDLVEDPSNL
VPVNTFDSGLDTQTSPSLDVRSDVHTEQQDDGALCYEPPRFPSLDIPFLSCDLVQSGNDM
QQEYSPLGIRQLMMSSMNCLTPFRLWDSPSRDGSPDAVLKSAAKTFTGTPSILKKRHRDL
LSPLSPLSDRRIDKKLGTDVTSSLARDFSRLEVMFEDSETQEAPLHYPSSNQQRTSDAHE
EDKENMDTCETRIEEGTGTVAISADEIAQKHFDDGESQEKMKQGNADVDAKTKADAVPSS
HDAQQSSGVLAEHNTNDLLLYSPDQAGCKAEKALSLSAGTPKVQHSKSFSAKQCSSVITP
TITVKKRESYLVTQTCIQSDLLSAPLETTSDNAGNGASTETIFGVTPLKRSIDSPSAWKS
PSAWKSPSAWKSPWFINSFLPGPRVDTEITIEDIGFFMSPGDRSYDAIGLMKQISEHTAS
AYANAQEVLGNETPESLLKERRKDHGIVDSDKNLAPPNQLGSSSPSAPNVVVERRTLDFS
ECETPGKGKESGKFLNTKSFSSPSSYLLKGCR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacagaacaaattctactccagaagggtcgggtggtgacagtattcagaga
gctcgagctctccatgggaggtctagtgggcctacgaggcgttctacaaaaggacaatgg
acgcctgaagaggatgaaatcttgcgtagggcagttcagagttttaaaggaaagaattgg
aagaaaatagcggagtgtttcaaggatcggactgatgtgcaatgcctgcataggtggcag
aaagttttgaatcctgaattggtcaagggtccatggtctaaagaggaggacgaaattatt
gttgaattggtcaaaaagtatggcccaaaaaagtggtccactattgcacagcatttacct
ggacgtattggtaagcaatgcagggaaaggtggcataatcatcttaatcctggaataaac
aaagaagcatggacgcaggatgaggagttggctctgattcgtgctcatcaaatttatggg
aacaaatgggcagagctaacaaaattcttgcctggaaggacagacaacgctataaaaaat
cattggaacagttctgtgaaaaagaagttggattcttacttgaagtcgggattactacca
gacttagaaggaacgcctcatgttggacaccaaaaccaacccataatctcatcttgttca
agagttcagaacagtggagatgatagtgctcccagaggtgctgaaggagaagaaatatca
gaatgcagtcaagattcaaatgttgctggttgctttcagtctggaactgcaatggtcaat
gtggtattacatactagagatcgatcgcatatacgtgaagtatcccggttaggaaatgac
ccaagctccagtccagcgtcctgttcagaaccatattacccgtctatgggggatgccact
ttttccatcccagaaatacctcctgaaattgttagctcttccaaatttatagagcagagt
ttctcacatgatgctggagagtcaatgagtggggatttccagtttaatatgcaggagtta
actaatatttcttcactagaatcagagcaggaggcatccgggatgcatacccattgtatg
agttctaatgagatccatgatgtggtcaactttccatttcagactgctggtgcatttcct
gcttctacttccatggggaatatggcggatggttcagttaaatcagagcggatgttgata
tctgatgatgaatgctgcagggctttgttttctgaggcaataaatcagggatatttctct
agagattttacaaatgggttaaacatggttgatttgattgcatgcacagattcattactt
ttacaatcgtcgtcaaacctccagatgtctgaaaccggtagatcttctcaactttattgt
cctttgaactcagatgtagttggaacttcatgctctcaaccagtttctgctcataatggt
ccactgatatttgctggagaggctaataatttattcagagttcaagaacaggagtatgtc
acaaattcagaggatggatttgtctacactaatgacactgccagatctcccagtaatgtt
gttggaaatgagactagaatgcaagagcaatctgatctggttgaggatccttcaaattta
gtccctgtaaatacatttgattcgggattggacacgcaaacttctccttctctggatgtg
agatcagatgtgcacacagaacagcaggatgacggagctctatgttatgagcctcctcgt
tttccgagtttggatattccatttttaagttgtgatcttgtacaatcaggaaatgacatg
caacaagaatatagtccccttggaattcgtcagctgatgatgtcctctatgaattgcctt
actccatttaggttatgggattcaccatctcgcgatggtagccctgatgctgtgctgaaa
agtgctgctaaaacatttacaggcacaccatccattttgaagaaacggcaccgtgacctg
ttgtctccattgtcgccattgtcggatagaaggattgataaaaagcttgggactgacgtg
acctccagtttggccagagatttttcacgtttagaggtaatgtttgaagacagtgagaca
caggaggccccattgcattatccatcttcaaatcagcagaggacctctgatgcgcatgaa
gaagacaaagagaatatggacacctgtgaaaccagaatagaagaagggactggtactgtt
gcaatatcagctgatgaaatagcacagaaacactttgatgacggtgaatcccaggaaaag
atgaagcaaggaaatgctgatgttgatgctaagactaaggctgatgctgtcccctcttct
cacgatgcgcaacaatcttctggagttcttgctgaacataacacaaatgatctgctattg
tattctcctgatcaagctggttgtaaagctgaaaaagccttgagcttgagtgctggaact
ccaaaagtacagcatagtaaatctttttctgccaaacaatgttcctctgttattactcca
actataacagtgaagaagcgagaaagttatttggttacacagacttgtatacaatctgat
ttgttgtcagctcccctggagacaactagtgataatgctgggaatggtgctagtactgag
accatattcggtgttacaccacttaaaagaagtattgattccccttcagcatggaaatcc
ccttcagcttggaaatctccttcagcatggaaatccccctggtttatcaactcctttctt
cctggtccaagggttgatacagaaataacaattgaggatataggatttttcatgagccca
ggagatagaagttatgatgccatagggttgatgaaacagataagcgagcatactgcttct
gcatacgccaatgcccaggaagttttgggaaatgaaactcctgagtcattgttgaaggaa
agacggaaagaccatggcattgtggactcggataagaatctcgcaccaccaaatcagctg
gggagtagttccccttccgcgccaaatgttgtggtggagcgtcgcacccttgactttagc
gagtgtgaaacacctgggaagggaaaagaaagcggaaaattcttgaatactaaaagcttc
tcaagtccatctagctatttgttgaagggatgcagataa
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