KEGG   Rosa chinensis (China rose): 112169344
Entry
112169344         CDS       T06020                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 10
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112169344
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112169344
   03036 Chromosome and associated proteins [BR:rcn03036]
    112169344
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     112169344
   Coactivators
    SAGA/TFTC/STAGA complex
     112169344
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     112169344
    STAGA complex
     112169344
    TFTC complex
     112169344
    SAGA complex
     112169344
    SLIK complex
     112169344
SSDB
Motif
Pfam: TFIID_30kDa GLV1-2 Cyclase
Other DBs
NCBI-GeneID: 112169344
NCBI-ProteinID: XP_024162126
LinkDB
Position
6:26906826..26910793
AA seq 141 aa
MNHNNHQSQQSSEGRHDDDEASLSEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLIR
LVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRPILTMEDLSKALREYGVNV
KHQEYFADSPSTGMDPASREE
NT seq 426 nt   +upstreamnt  +downstreamnt
atgaaccataataaccaccaaagccagcaatcgagcgaaggcaggcacgacgatgacgag
gcatctctctctgaattcctcgcctccctaatggactacactcccaccatacccgacgag
cttgtggagcattacttggccaagagcggcttccagtgtcccgacgttcgattaattagg
ctggtagctgttgccacacaaaagtttgtcgctgaggttgcaactgatgctctacagcaa
tgcaaagcaagacaggcagcagtggtgaaagacaaaagggacaaacagcaaaaggataaa
cgcccaatattgactatggaagacctgtcaaaggcattgcgtgagtatggcgtcaatgtg
aagcaccaagaatattttgctgacagcccttcaactgggatggatcctgcatcaagagag
gaataa

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