Rosa chinensis (China rose): 112169366
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Entry
112169366 CDS
T06020
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112169366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112169366
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
112169366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_22
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
112169366
NCBI-ProteinID:
XP_024162163
LinkDB
All DBs
Position
6:complement(12239625..12248709)
Genome browser
AA seq
958 aa
AA seq
DB search
MEDEEEVISLSDSSSDSSSSDDYTADPHDLDLGEEEEEEDQELENEPEVQNDDVRENRRR
PKARPPLPPPSGKDRKSKNVDALLSGNLVVKRQPLLPRVLSVTEGATVCRKPFKPPCSKG
YDDGNDQLARRLSARRRFVPWGGSSSAPFFPVIERFPSLPNDAEKDVVEESVTLPPGIDP
LVLWQPEEFEDGDANMVQIVVDPLLVRFLRPHQREGVQFMFDCAAGINSAANIHGCILAD
DMGLGKTLQSITLLYTLLYQGFDGKSMVKKAIIVTPTSLVSNWEAEIKKWVGDRVCLIAL
CESTRDDVVSGIDQFTSARSRLQVLIVSYETFRMHCTKFSHSESCDLLICDEAHRLKNDQ
TMTNRALAALSCKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAHFRRYYEAPIICGR
EPNACEEERKLGLERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQLDLYN
HFIHSKNVKRAISEDTKQTKILAYITALKKLCNHPKLIYDTIKSGSPGTSGFEDCIRFFP
PQMFSGRSGSWTGGDGAWVELSGKMHVLARLLAQLRKKTDDRIVLVSNYTQTLDLFAQLC
RERRYPYLRLDGTTSISKRQKLVNQFNDPSKVEFAFLLSSKAGGCGLNLIGGNRLVLFDP
DWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQKEQADSP
MAQGNLSIEDLRDLFTFHENVRSDVHEKMNCNRCQTYHDTPQSTAEEDINQSTYKSSESA
LEISDIGGFAEITGCLQKLKSSEKQIGTPLEEDLSNWGHHFFSTSVPDAILQASAGDEVT
FVFTNQVDGKLVPIESKASPKMQGEEGKENIFKSKQNLNQKSMLMSWQRKPLESLSSSVN
TARSTLSAPFRPSQNTTVQSGITSIKGSVALKPKLSLGNRLPQKRSSPDTVEHDDDFQ
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaagaagaagtcatctcactctccgattcctcctccgattccagttccagc
gacgactacactgccgacccacacgacttggatctcggagaggaagaagaagaagaagat
caagagctcgaaaacgaaccagaggttcaaaacgacgacgtacgcgagaatcgtcggaga
cccaaggcccgccctccgcttccgccgccgtccggaaaagatcggaaatcgaagaatgtc
gatgctctcctaagcggcaaccttgtggtgaaaagacagcctcttcttccacgagttctg
tcggtgacggaaggagcaacagtttgtaggaaaccgtttaaaccaccatgctccaaaggc
tatgatgatggaaatgaccagctcgctcggcgtctctcagcacgcagacggtttgttccc
tggggcggttcatcaagtgcaccgttttttccagttattgagaggtttcctagtttgcca
aatgatgctgagaaagatgtagtggaagagagtgtgaccctgccacctggaattgatcct
ttggtcttgtggcaacctgaagaattcgaggatggggatgctaatatggtgcagatagta
gtggaccctctgcttgttcgtttccttcgaccacatcaaagagaaggggttcaattcatg
tttgattgtgctgcgggcataaatagtgctgcaaatatacatggatgtattcttgcagat
gatatgggtttgggaaagacattgcagtcaatcacattactttatacccttctttaccaa
gggtttgatgggaaatcaatggttaaaaaggccattatagtcactcccaccagtcttgtg
agcaattgggaggctgagataaagaagtgggtcggagacagagtttgcctcattgctctg
tgtgaaagtaccagagatgatgttgtttctggaattgatcagttcacaagtgctcgcagc
cgtttgcaggttctaattgtttcttacgaaacattccgaatgcattgtacaaagtttagc
cacagtgaatcgtgtgaccttcttatatgtgatgaggctcacaggctaaagaatgaccaa
acgatgacgaatagggcattggctgctctttcatgcaagcggaggattttgttgtcagga
actccaatgcagaatgacctagaagagttctttgccatggtcaacttcactaatccagga
atcttaggtgatgctgcacattttcgtcgctactatgaggcacctatcatttgtggaaga
gaacctaatgcctgtgaagaagagaggaaactaggtcttgagcgctcttcagaactcagt
gcaaaagttaatcagtttatactgcggaggactaatgcactactttcaaatcacctgcca
ccaaagataattgaagttgtctgttgcaagttgactcctctccaattggacctttataac
cattttatacattccaaaaatgttaaacgagcaatctcagaagacacaaagcaaacaaaa
atattagcttatataactgctttaaagaagctatgcaatcatccaaagctcatctatgat
actataaaaagtggaagtccaggaacttcaggttttgaggactgcattcgctttttccct
ccacagatgttctctggaagatctggatcatggactggcggagatggggcttgggttgaa
ctgtcaggaaagatgcatgttttagctaggttacttgcccaattacgaaagaagactgat
gaccgtattgtccttgtctcaaactatacgcagacactggacctttttgcccaattatgc
cgagaaagaagatacccatatttgaggcttgacggaacaacttctatcagtaaaagacag
aaattagtaaaccaattcaatgacccctcaaaggttgaatttgcatttctcttaagcagt
aaggctggtggctgtggtctcaatttgataggcggaaatcgactggtgttgtttgatcct
gattggaatccagcgaatgataaacaagctgctgctagagtttggagggatgggcaaaag
aagagagtatacatttatagatttttgagtactggaacaatcgaagaaaaggtctaccaa
cgtcagatgtcaaaagaagggcttcaaaaagttattcagaaggaacaagccgatagcccg
atggcacaggggaatctttcaattgaggacctacgcgatttgttcacatttcatgagaat
gtgaggtctgatgtgcatgagaagatgaactgcaaccgttgtcaaacttatcatgataca
cctcagagtacagcagaggaagatataaaccaatcaacttataaaagcagcgagtctgca
ctagaaatctctgatataggtggatttgcagaaattactggatgcttacagaagttaaag
agctcagaaaagcagatcgggacacctctagaggaagatttaagtaactgggggcatcat
ttcttctctacttcagtacccgatgctattctccaagcttcagctggtgatgaggtcaca
tttgtttttacaaaccaagtggacgggaagcttgtgcctatagaatcaaaagcaagtcca
aagatgcagggagaagaaggaaaagagaatattttcaaatcaaagcaaaacctgaatcag
aaatccatgctaatgtcttggcaaagaaaaccacttgaatctctttcttcaagtgtaaat
actgccagaagcaccttatcagcccctttcaggccctcacaaaacaccactgtgcaatca
gggataacctctataaagggttcagtagcattgaagcctaaactctctcttggaaatcgg
ttgccccagaaaagatcttctcctgatactgttgaacatgatgatgattttcagtaa
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