Rosa chinensis (China rose): 112169562
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Entry
112169562 CDS
T06020
Name
(RefSeq) tRNA pseudouridine synthase Pus10 isoform X2
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112169562
Enzymes [BR:
rcn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
112169562
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112169562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
INSC_LBD
Motif
Other DBs
NCBI-GeneID:
112169562
NCBI-ProteinID:
XP_024162383
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All DBs
Position
6:complement(63430383..63436652)
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AA seq
530 aa
AA seq
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MATEIAKASPATVNGDDVGALYDVVRALPSHAVIELFSIGVCTRCILRLFGVRESVHYRS
PLSPSTLSSVFSDSTDLDNHSSLREPVVCRLCLGILQFTYCEDKDKKVVRKESADGLAGY
ISDLIREQGFEIDGFSLEVSIPPVILENERIVWDHMKTKYESEHWFQERSLPECISAKDA
LKISLTETLETKLDCKSSIGTFRIRLTYTYPISSKTVENSVEGCHGSKRRKTGTHNGLDT
RGDDIKRSGFSTSEAGSLQAIELSKCLKLRLEQTNEPCCLEFLCYRTQIYFGGRYLKYSR
NVSQSCWIIDDERMGEASVEEIMGSNILPICRGDKYKFHAAGREDIDVRMLGSGRPFLVE
VQNARYVPSQESVKDLQTKINNLQNKLVGVKNLKLVGSQSWDLMREGEAEKQKQYTALVW
TSRILKDEDLQSISSIKDMCILQRTPIRVLHRRSPLEREKIIHWMRIERIVGSSQYFLLH
LCTQAGTYIKEFVHGDLGRTQPSFGSILGTRAEILRLDVTDVKMDCFLTE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaaattgcaaaggcttctccggcgaccgtcaatggcgacgatgtgggggca
ctctacgacgtcgttcgagctctgcccagccacgccgtgattgagttattctcaataggg
gtatgcaccagatgcattttgcggttgtttggggtcagagagagcgtgcattatcggtct
cctctatcaccatccacgctgagctcagttttttcggattcaaccgatttggacaaccac
agtagtttaagagagccggtggtttgtaggctttgtttaggaatcttgcagtttacttat
tgtgaggataaggataagaaggtggtgagaaaggagagtgcggatgggttggctggttac
atttccgacctgattagggaacagggatttgagattgacggtttttctcttgaagtgtct
ataccaccagttatcctggaaaacgaacgcattgtttgggatcatatgaaaacaaagtat
gaatctgaacattggtttcaagaaaggtcactgcctgaatgcatttctgcaaaagatgct
ttgaaaatttctcttactgaaaccctagaaacaaagctggattgcaaatcaagcataggc
actttccgcattcgtttgacgtacacataccctatatcatcaaaaacagttgagaattct
gttgaggggtgccacggcagcaaaagaagaaaaacaggcacacataatggtttggacaca
agaggtgatgacattaaacgctctggattttcaacaagtgaagctgggagtctgcaagct
attgaattgtcgaaatgtctgaagttacgtctggagcagaccaatgaaccttgctgtttg
gagttcctctgttaccggacacaaatatactttggtgggagatacctaaagtactcgaga
aatgtaagtcaaagctgttggattattgatgatgaaagaatgggagaagcatctgttgag
gaaataatgggtagcaacattcttcctatatgtcgtggtgacaagtacaaatttcatgct
gcgggcagagaagatattgatgttcggatgttgggttccggaaggcctttcctggttgag
gtacaaaatgcacgctatgtcccatcgcaggagtctgtaaaagatctgcaaacaaagata
aataatttacaaaataaattggttggtgtgaaaaatctgaaactggtgggcagtcaatca
tgggatctcatgcgtgaaggagaagcagagaaacagaagcaatacactgcacttgtgtgg
acttctcgcattctcaaggatgaagacttgcagtctatatcttcaattaaggacatgtgt
attctgcaaaggactccaatcagggtgcttcaccgccgcagtccattggaacgtgaaaag
attatacattggatgagaattgagaggattgttggaagttctcagtattttcttctgcac
ctatgtacccaggctggaacatatatcaaggaatttgttcatggggatcttggacgcacc
caacctagctttggatcaattcttggtactagagcagagatactgcgacttgacgtaacg
gatgttaaaatggattgttttctcactgaatga
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