Rosa chinensis (China rose): 112169814
Help
Entry
112169814 CDS
T06020
Name
(RefSeq) long chain acyl-CoA synthetase 2 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00061
Fatty acid biosynthesis
rcn00071
Fatty acid degradation
rcn01100
Metabolic pathways
rcn01212
Fatty acid metabolism
rcn04146
Peroxisome
Module
rcn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112169814
00071 Fatty acid degradation
112169814
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112169814
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcn01004
]
112169814
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112169814
Enzymes [BR:
rcn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112169814
Lipid biosynthesis proteins [BR:
rcn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112169814
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of breast milk
112169814
Exosomal proteins of breast cancer cells
112169814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112169814
NCBI-ProteinID:
XP_024162641
LinkDB
All DBs
Position
6:complement(16641840..16680249)
Genome browser
AA seq
659 aa
AA seq
DB search
MDQFAVKVEEARPAADGRPSAGPVYRSIYAKDGLLELPEGFESPWQFLSDSVKRNPSGRM
LGQRQVNAKKAGPYVWSTYQEVYDAAIRMGSAIRSRGVNPGDRCGIYGSNCSQWIIAMEA
CNSHAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPAIILCLPNCSTHLKTIVSFT
NVSSTQKKEAEELGVSCFSWEEFFQLGNSDYELPQKQRTAVCTIMYTSGTTGEPKGVIIT
NAALMLEVLSTDHILFLTDRVCTEEDSYFSFLPLAHIYDQIIESYCIYKGSSIGFWRGDV
RFLLDDLQELKPTTFCGVPRVYDRIYTGIASKVSSGGVLRKTLFQYAYNYKLANLENGLP
QEKAAPLLDKLVFNKIKQALGGRVRIMLSGAAPLPRHVEEFLRVTSCSTLSQGYGLTESC
GGCFSSIGNVYPMVGTVGVPLTTIEARLESVPELGYDALSSVPRGEICLRGKTLFSGYHK
RADLTEEVLIDGWFHTGDIGEWQPNGAMKVIDRKKNIFKLSQGEYVAVESIESKYLQCPL
VTSIWVYGNSFESFLVAVVVPDRKALEDWAAEHHLTDDYKSLCQNMKARKYILDELNSIG
QKQQLRGFELLKAIHVEPNPFDIERDLMTPTFKLKRPQLLKYYKDQVEKLYSEAKGGKV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtttgcggtgaaggtggaggaggcgaggccggccgctgatgggaggccgtcg
gcagggccggtgtatcggagcatttatgctaaagatgggctgttggagttgccggagggg
ttcgagtcaccgtggcagtttctcagtgactcggttaagaggaacccaagcggtcgaatg
cttggtcaacgccaagtcaacgcgaagaaggcgggtccatatgtgtggagtacctatcaa
gaggtctatgatgcagccattcgtatgggttcggccatcagaagccgtggtgtcaatcct
ggagatcgttgtggtatatatggatcaaattgctcccaatggattattgcaatggaggcc
tgtaacagccatgcgattacatatgttccactttacgacacccttggtgctaatgcagtt
gagttcatcatcaaccatgctgaagtttcaatagcttttgttcaagagaacaagatccct
gctattatattatgccttccgaactgttctacgcatttaaaaacaattgtcagcttcacg
aatgtttctagcactcaaaagaaggaagcagaagaactgggggtatcttgcttttcgtgg
gaggaattctttcagttgggaaattcagattatgaactacctcaaaaacagaggactgct
gtttgcacaataatgtatacaagtggaacgactggagaaccaaaaggcgtaatcattact
aatgcagcattaatgttggaagtattgtcaacagaccatatacttttcctaacagataga
gtgtgtacagaagaagattcatatttttcgtttctcccgttggcccatatatatgaccaa
ataatcgagagctattgcatctacaagggatcttcaataggcttctggcgaggtgatgtc
aggtttttactggacgaccttcaggaactaaagcctactacgttttgtggggttcctcga
gtttatgaccgtatatacactggtattgctagtaaagtttcatctggtggtgtgctgagg
aagacccttttccagtatgcatataactacaagttggcaaatctggagaatggtttacca
caggaaaaagcggcacctctcttggacaagcttgtatttaacaagataaaacaagcatta
ggaggacgagttcgtataatgttgtctggtgctgcacctttgcccaggcatgtggaggaa
tttttgagggtcaccagctgcagcactttatcccaaggatatggccttactgaaagctgt
ggtggctgtttttcgtccatcggcaatgtttatcctatggttgggactgtgggtgtcccc
ttgacaactattgaagcacggcttgagtcggtcccagaactgggatatgatgcactttct
agtgtgccacgtggagagatttgcctaagaggaaaaaccttgttttctggttaccacaag
cgagcagatctcactgaagaagtccttattgatgggtggttccatacaggtgatattgga
gaatggcagcctaatggagcaatgaaagttatagacaggaaaaagaatatatttaaactg
tctcaaggtgaatatgttgctgtggaaagcattgaaagcaaatacttgcaatgccccctt
gtcacatcgatttgggtttatgggaacagcttcgagtcatttcttgttgctgtggttgtt
cctgacagaaaggccttggaggactgggcagctgagcatcatttgactgatgactacaaa
tcattgtgtcaaaacatgaaggcaagaaaatacattttggatgagctcaatagtatcggt
cagaaacagcaacttcgagggtttgagttgttaaaagcaattcatgtggaaccaaacccc
tttgacatagagagggatctcatgaccccaactttcaaactgaaaagaccgcaattactc
aaatattacaaggatcaagttgaaaaactttatagtgaagcaaagggtggaaaagtataa
DBGET
integrated database retrieval system
