KEGG   Rosa chinensis (China rose): 112169852
Entry
112169852         CDS       T06020                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcn03041]
    112169852
Spliceosome [BR:rcn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112169852
 Complex B
    112169852
SSDB
Motif
Pfam: zf-CCCH RRM_MUD2_C RRM_1 zf_CCCH_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 112169852
NCBI-ProteinID: XP_024162678
LinkDB
Position
6:32879680..32887677
AA seq 686 aa
MGESETPADKEGDGGIQPKTEAGMSRKEKRKAMKKMKRKQTRKELALKEQELINMEQEEA
KRSVSVRIMFEERERAWTEAMEIRKQKRIEHEEEERRNKALEDEELSRKQQIKNANDDGE
DDWEYVEEGPAEIIWKENEVLVKKKRVKVPKRNKDQQSIKEDSDRPTSNPLPPQSEAFDD
YKNASLSAQQLIETVAEQVPHFGTEQDKDHCTFHLKTGACRFGQHCSRVHFYPDKSCTLL
IKNMYNGPGLTWKQDEGLEYTDEEIERCYEEFYEDVHTKFLKFGEIINFKVCINGAPHLR
GNVYVQYNALESALVAHQFINGRYFAGKQISCDFINVTRWKVAICGEYVKSRYKTCSRGR
TCNFIHCFRNPGGDYEWADSDRPPQKYWVEKMVALFGYSDAYEKQMMEDNSGQLRNSSKK
SMTDSQRFVVQRSSSRDGSCSSFTGSSRRYDNENNAPKGTGHHRPSGEENAYLKDFNHRK
NRKYCIESDGELLHMDGDTDRDIYHGHRRKSARQENGDHKNKTYETDSDGHLLKRGQSRV
TEHGSTRKSSSQRRKAGVHHDYGDCEKKVHEVGGDWSTRDRESYHDCRRSSGHKRKARYA
DNHKERKSKAHDSDGEWSDSNRKGDEPHIIRKSLVHIGNASNSLKQQESSARSCTAELSE
EMLDKDAEKDSSHASKRSKHWDKSGR
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgggagagtcagaaaccccagcagacaaagaaggagacggaggcattcagcctaaaaca
gaggcggggatgagccggaaggagaagaggaaagccatgaagaagatgaagcggaagcag
acgaggaaggaactcgctctcaaagagcaagagcttatcaacatggagcaagaggaggcc
aagaggtccgtgagtgtgaggatcatgtttgaggagcgagagagagcttggactgaagcc
atggagattcgaaagcagaaacgaatcgaacacgaagaagaggagcgtagaaataaggct
ctggaagacgaagaactatctcgcaagcaacagatcaaaaatgcaaatgatgatggtgaa
gatgactgggagtatgtagaagagggtcctgctgaaatcatctggaaggaaaatgaagta
cttgtcaagaagaaaagagtcaaggttccaaagaggaataaagaccagcaaagtataaag
gaggattctgatcgacctacatcaaatcctctccctccacaatctgaagcttttgatgat
tacaaaaatgcatctttatcagcgcagcagctgattgagactgtggctgaacaagtaccg
cattttggaactgaacaggataaagatcattgtactttccatttgaaaactggagcttgt
cggtttggtcagcattgcagcagagtccatttttacccggataaatcatgcacactgctt
atcaagaacatgtacaatggtcctggccttacttggaagcaggatgaggggctcgagtac
actgatgaagaaattgagcgctgttatgaagaattttatgaggatgttcatacaaagttc
ttgaagtttggagaaattataaatttcaaggtgtgcataaatggtgcaccccacttgcgg
ggaaatgtgtacgtacagtacaatgcactggagtcagctttggtggcgcatcaatttatc
aatggtcgctactttgctgggaagcagataagttgtgacttcatcaatgtgacgagatgg
aaggttgccatatgtggggaatatgtgaagtcgaggtacaagacatgttcccgtggtagg
acatgcaattttatccactgtttccgcaatcctggtggagactatgaatgggctgatagt
gatagaccaccccaaaaatattgggtggaaaagatggttgcattatttggttattctgat
gcatacgagaaacagatgatggaggataactctggacagctgaggaactctagcaagaag
tcaatgacggattcacagaggtttgttgtgcaaagatctagttctagagatgggagttgc
tcaagttttactggttctagtagaagatacgacaatgaaaataatgctccgaagggcacc
ggccaccatagaccttcaggtgaagagaacgcttacttgaaggacttcaatcacaggaag
aacaggaagtattgtattgaatctgatggagaattgttgcatatggatggagatacggat
agagatatataccatggtcacagaaggaaaagcgcaagacaagaaaacggagaccacaag
aacaaaacctatgaaactgattccgatgggcatttattgaagaggggacagagcagggta
actgagcatggtagcaccaggaaaagctcaagccaacgacgaaaagcaggagtgcatcat
gattacggtgattgtgagaaaaaagttcatgaagttggtggagattggtcaactagagac
agagaatcataccatgactgcaggagaagttcaggacacaagaggaaagcgagatatgca
gataatcacaaggaacgtaagagtaaagctcatgattcagatggagagtggtcggacagc
aacaggaaaggtgatgagccccatataataaggaaaagcttggtgcatattggcaatgct
tctaatagcttaaagcaacaggaaagttccgccaggtcttgtactgctgaattgagtgaa
gaaatgttggacaaagatgcagaaaaagactctagtcatgctagcaaacgatcaaaacac
tgggataaaagtggcagataa

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