KEGG   Rosa chinensis (China rose): 112169915
Entry
112169915         CDS       T06020                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    112169915
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rcn01001]
    112169915
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rcn03032]
    112169915
   03036 Chromosome and associated proteins [BR:rcn03036]
    112169915
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112169915
Enzymes [BR:rcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     112169915
Protein kinases [BR:rcn01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   112169915
DNA replication proteins [BR:rcn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    112169915
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    112169915
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    112169915
SSDB
Motif
Pfam: PI3_PI4_kinase FATC FAT HEAT TAN SOAR
Other DBs
NCBI-GeneID: 112169915
NCBI-ProteinID: XP_024162786
LinkDB
Position
6:complement(29380343..29418277)
AA seq 3017 aa
MVKSRDVQEIVAKLSSDKAKTREEGIKLLNTWLEGERSNDFCKYLAQKTAKLKPAEIPHS
ETWPFFITMLIQCASLEISPSKRRSPKLVFAKTLRIVVQRAEDDKFSGNLLPLLPVVKSL
FNHIWEVLNNDPSYQLQSEYGLILQDLLVVRDYRFHMRKRIYCSLVLLYMENMEKILSGR
NDNQHIIKDVNTLRSLLENPPGDFPENLRDGVVRGFVRIFSCIRDEGKVSRKLIECINTF
LLKDGPNLGRQSLEIHNAVHQFVFRCLLTTHDQTFKDCLIFYAMLQLNMTRGATDGSFLV
QHLLDIVYKELDQSSVSNTIVPRTDAAKYEKFGTLSSSHCALVELAAAVLYRACINLTKA
PSTEKRVKREHVAAHLREALMKGKWLWYASFCCLTRKYSTRIGKDLFMYWFEGICTSFQR
ILNEANVGHAYDGLLWTLRSLQELSSVLLLPDPKRKKPLSSSPLNEFDCGWQLVWSCLMQ
GFPLFSNVTAVVDAALVLLGNIISSDLVHTCVVPQDVWDLRIFKQMPSVSLLYFISCYFS
RKGSQVSGDVRDILHLRKNLLRAVLGQLKEMESSIHNKQLVLLLPAAVNALCAGCVPFTQ
CHTGLIQSYTSLDATDAVNKTEKPEHNCLHGLFDCTVEVLADIGPGPSVEVFPSQHYPNL
RLPRQLREPLLSEMETLILGALVEKEMRRRSLSDIFFKCAILSNIIYGSVLTRQREEVSS
FVSKLGRYLLELLDFAVTVTQGNDCLALSSDLLSNGASSIVASFRSFAHSPIFSRQHDQN
HVDAELYGAIMQVMERLLKAMSNVYEEFSSGAGERLTACDTLKQYSFPADSNKSRIVDME
LDVNEDTGDMDTLSDGGKTASGVFSSVKKWKLGMISLISNFFSVLHTTWDVLFKLLSKER
DQMVREKIMFSLCQHPFWSSAENFKEMVGLMTKMIKIQVSLKLDCGKVLSAIHGLLGTLS
SLDTNWKDKGFTDSLGERGPEQNLMHLRDAVAECDLLDWFGRVKLIDCICNFVLLSPQIG
QTLIERLLTMLQDPDYRVRFSLARRIGVLFQMWDGHEELFNDICSNFGVKLVVSSKEKLV
TASEVLASGPQPQPTMETVIITLMHLALQSEKIELEAVFMICVVAAIDPCQRELIFVILD
NLSRQLRYASRFKYLEELLGSILFSWVACGVSLAALVEIRQLFVSDSEPSYFMQYCCHWL
LPALVLHGDSSSLSWVARIACQPPAVLVKNHFVQIFSVCMGLHCSKRSGWEKGADVLQNS
ILHLAQISENERDKLIKKHMVSIVSHILSLASSAPNPTVPFFSRDTIVRGIQTIVDGFLE
MEDYATSVCVVDKINIFRPDRVFMFIVELHYRIAAATHHRHTCHRLAGIEVLIDVLGHRA
AMASTSNYLFNLIGQFIGYHDLQDQCCRVISVLLKTFKSNPSREIISVLGEQLQFLVSKL
VACCIPSETKGEQFGCGSSQVLSLLFQLTVHSDPSLYDYIRELEPFPEIDIFDEIRKFHQ
DLCRAYSPRDHLLKFVRRSGHLPPRLLLWSLQALHKKLLLGETFQIEKNAADRVEDRYWH
CDDEIMTAVWTMVRMCGSEDANSIRVLVSDFISRVGIGDPHCVVFHLPGNSSNIHVCQPV
NQGFSTEGTFPIDTGLSEELLVALLKLLKKYLMDDSVKIVDMTSQALRGILSTQRGQNTL
LSFDSYERSLIEVHSKGVNIELVEKLLLDLEIKFKAEAIPIENSTVWVTHGKTFDEWICP
LVCSLIGLCSDVILRLCQDIVLMKAEVAELLLASIIVNLAGKKDMDVNLYKLISLQVQEH
VFTDSNKLIKSIQVWLNALNELRLCHVMERSSLLPLKQESSKSAKPSSYSSKSRSTSVKA
RESASMYGAMAMSTPLWDKVYWLSIDYLVVAKSAVVCGSYFTAMMYVEHWCEEHFNILTL
GSPDFSHFEMLPRHIEILVAAATQINEPDSLYGIIQSHKLTSQIITFEHEGDWSKALEYY
DLQVRSAALVPMDFGSRSLSLEQTQPDNFSNSTPDDPMRQRKPYKGLIRSLQQTGCMHVL
DFYCQGLTSRKGQFHHDLEFTELQYEAAWRAANWDFSLLYAGDNSISSTLHIKANHFNEN
LHSCLRALKKGNFNEFHEKLKDSKQELVWSVSRASEESTEHIYSAIIKLQILYHLGKAWD
LRWRSFPSECMNFHPQMEEVNSEPLIPTVDQLSWLSVDWSSILERTQLHMSLLEPFIAFR
RVLLQVLNCKDSMVQHLLQSTCTLRKGSRFSQAAAALHEFKFLCVESGEQQSSLYWLGRL
EEAKLLRSQGQHEMAISLAKYVAEYSLSNEESSDVHRLVGKWLAETRSSSSRTILEKYLK
PAVSLVEDQKATDKRSRDRQSQTHFHLAHYADALFRSYEERLSSSEWQAAMRLRKHKTTE
LEALIRRLKCSTKGEKTDYSIKIQELQKQLAMDKEEAEKLQDDRDNFLSLALDGYKHCLV
VGDKYDVRVVFRLVSLWFSLSSRKSVVDSMLTTITEVQSYKFIPLVYQIASRMGSLKDSQ
GSHNFQFALVSLVKKMAIDHPYHTIFQLLALANGDRIKDKQRSKNSFVVDMDKKLAAENL
LRELTSYHGSIINQMKQMVEIYIKLAELETKREDTNRKLLLPRELRNLKQLELVPVVTAT
FPIDQSCQYDEGSFPYFKGLAESVTVMNGINAPKVVECLGSDGCRYRQLAKSGNDDLRQD
AVMEQFFALVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGVLEWVNGTLPLGEYLIGSMR
NGGAHGRYGIGDWSFLKCREHMANGKDKRKAFQEVCGKFRPVMHHFFLERFLQPADWFEK
RLAYTRSVAASSMVGYIVGLGDRHAMNILIDQTTAEVVHIDLGVAFEQGLMLKTPERVPF
RLTRDIIDGMGVTGIEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKAL
QRQKEMDYESDTSLGDSEDEYEGNKDAARALMRVKQKLDGYEEGEMRSIHGQVQQLIQDA
IDPERLCQLFPGWGAWL
NT seq 9054 nt   +upstreamnt  +downstreamnt
atggtaaagtctcgagacgtccaagagattgtggcgaagctctcgtccgataaagccaag
actcgagaagaagggataaagttgctaaatacatggttagaaggagaaagatcaaacgat
ttctgtaaatatcttgcacagaaaactgccaagcttaaaccagctgaaattcctcactct
gaaacatggcctttctttattactatgttgattcaatgtgcttcattggagatatcccca
agcaagcgccgatcaccgaaattggtatttgcaaagaccttgaggatagttgtgcagcga
gcggaggatgataagttttcaggcaatttattgccattgctacctgtggttaaaagtctt
ttcaaccatatttgggaggtcttaaacaatgatccaagctaccagttgcagtcggaatat
gggcttattctgcaggatcttttggttgtcagagattatcgatttcacatgagaaagcga
atttattgcagcctagtgcttctgtatatggaaaatatggaaaaaatcttgagtggtaga
aatgataatcaacatattatcaaggacgtaaatactctccgttcacttttggagaacccc
cctggagatttcccagaaaatctaagggacggcgttgttagaggttttgttaggattttc
tcttgtatcagggatgagggaaaggtttctcgcaaacttattgagtgtattaatacattc
ttgttaaaagatggtccaaatttagggcgtcagtccctggagatccacaacgctgtgcat
caatttgtctttcggtgtttgctgacaacccatgatcaaacttttaaggattgccttatt
ttttatgcaatgttacaactgaatatgacaagaggtgctactgatgggagctttttggta
caacatcttttagacatagtgtacaaggaattagatcaaagctctgtatccaatacaatt
gtgcccaggactgatgcagctaaatatgagaagtttggaactttgagcagctctcattgt
gccttggttgagcttgcagctgctgtactttatagggcttgtattaacttgacaaaagca
ccatcaactgaaaagagggtcaagagagagcatgttgctgcccatttacgagaggctctc
atgaaggggaaatggttatggtatgcttcattttgttgtcttactcgtaagtactctaca
cgcattggtaaagatctttttatgtactggttcgaggggatatgtacaagctttcaaaga
attttgaacgaggcaaatgtggggcatgcttatgatggtttgctatggacactgaggagc
ctgcaggaactctcttctgtgttgttgcttccggatccaaagcggaaaaagccattaagc
tcctctcccttgaatgagtttgactgtggttggcaattagtatggagctgccttatgcag
ggcttcccgttgttcagtaatgtaactgcagttgtagatgcagctctggtgctcctggga
aacataatttcaagtgatcttgtacatacatgtgtcgtacctcaggatgtatgggacctt
aggatattcaaacaaatgccgtcagtgtctttgttgtactttatatcctgttacttttca
aggaaaggttcgcaagtaagtggtgatgttcgagacattttacacctgagaaaaaacctc
ctgagagcagttttgggtcaactcaaggagatggagagttccatacataacaagcagttg
gtgttattattgcctgcagctgttaatgctctttgtgctggttgtgttccttttacacaa
tgccacactggactaatccaatcttacacttctctagatgctactgatgctgtaaataag
acagaaaaacctgagcacaattgtctgcatggactattcgactgcactgtggaggttctc
gctgatattggtccaggtccgagcgttgaggttttcccatcccaacactatccaaatcta
cggcttcccaggcaattaagagaaccactactttctgagatggagactctaattcttgga
gctctagtggagaaggagatgagaaggagatctttgtcagatatattctttaaatgtgct
atattgtcaaacatcatctatggttcagtcttgacaaggcaaagagaggaagtttcatca
tttgtctcaaaattgggtcgatacctgttagaattgctggattttgctgttactgtcacc
cagggaaatgattgtctagctctcagttctgatctcctatctaatggagcaagctctatt
gttgcttcctttagaagttttgctcattcccctatctttagtcgacagcacgatcaaaat
catgtcgatgctgaactatatggtgccataatgcaagtgatggagaggctcttaaaagcg
atgtctaatgtgtatgaagagttttccagtggtgcaggagaacgtttaactgcatgtgat
acgctaaaacaatattctttccctgctgatagcaataaaagtaggattgtggacatggag
ttggatgttaatgaggataccggagatatggatacattatctgatggtggcaaaactgcc
agtggtgtattctcttctgtaaagaaatggaagctgggcatgatatcgcttatttctaat
tttttctcagttttacacacaacttgggatgtcctgtttaagctcctgtcaaaagaaagg
gatcaaatggtcagggaaaaaattatgtttagtctttgtcaacatcccttctggtcctct
gctgaaaatttcaaggaaatggttggtttaatgactaaaatgattaagatacaagtgagt
cttaagctcgattgtggtaaggtattatctgctatccatggtttgctggggacactatca
tccttggacactaactggaaagataaaggtttcactgactctttaggtgaaagaggacct
gagcagaacttgatgcatcttcgagatgcggttgctgaatgtgatcttcttgactggttt
ggacgtgttaagctcatcgattgcatatgcaattttgttttactcagtcctcaaattggt
cagacactgattgaaaggttgttgacgatgcttcaagatcctgattatcgagttcgtttc
tccctggctagaaggattggtgttcttttccaaatgtgggatggacatgaggaattattc
aacgatatatgttccaactttggagtgaagttggtggtatcctcaaaagaaaaacttgtt
actgcaagtgaggtcttagctagtggtccacagcctcagcccacgatggaaactgtcatt
attactctcatgcatcttgctttgcaaagtgagaaaatagagttggaggctgtattcatg
atatgcgtggttgctgctattgatccttgtcagagggaattgatctttgtaatacttgac
aatctctcaaggcagttgcgctatgcaagcaggtttaagtacttggaggagcttttagga
tcaattctctttagttgggttgcttgtggtgtaagccttgctgcacttgtagagatacgg
caattatttgtgtctgattccgaacctagttacttcatgcagtattgctgccattggctt
ctcccagctctagttttgcatggggatagctctagtctcagctgggttgctagaattgct
tgtcaacctccagcagttctggtgaaaaatcacttcgtgcagatcttctctgtttgtatg
ggattgcattgtagtaagagatctgggtgggaaaagggagcagatgtgcttcagaattct
attttgcatcttgctcagatatctgagaatgaacgggacaaactcatcaagaagcatatg
gtatctattgtcagccacattctgtctcttgcatcatccgcaccaaaccccacggttcca
ttcttttctcgggatacgattgtacgtggaattcagacaattgttgatggatttttggag
atggaggattatgctacaagtgtgtgtgttgttgacaagatcaacatttttcgcccagat
agggttttcatgttcatagtggagctgcattatagaattgcagcagcaacccatcatagg
catacatgtcacagactagctggaatcgaggtgctgatagatgttcttgggcatagagct
gctatggcaagcacttccaactatcttttcaatctgatcgggcagtttattggttaccat
gatttacaagatcaatgctgccgtgtcatatctgtgcttctgaaaacttttaaaagtaat
ccatcccgagaaattatcagtgttctgggtgagcaacttcagtttttagtgtcgaagttg
gttgcatgttgcattccatctgaaactaagggagaacaatttggctgcggatcatctcaa
gttttatcattgctctttcagctaactgtgcattctgatccatccctttatgattacatc
agagaattggaaccattccctgaaatagatatctttgatgagattagaaagttccatcag
gatttatgccgagcttactctccaagagatcatctgctgaagtttgttcggagatctggt
caccttccaccaagattacttctctggagtctccaagcattgcacaagaagctacttttg
ggtgaaacatttcaaattgaaaagaatgcagcagatcgggtggaagatagatattggcat
tgtgacgatgaaattatgactgctgtctggactatggttcgcatgtgtggctcagaagat
gcaaatagcattagagttttggtctctgatttcatatctagggttggtattggggatcca
cattgtgttgttttccatctgcctggaaactcgagtaacatccatgtgtgccaaccagtc
aatcaaggcttttctacagagggcacatttccaattgatactggattgtctgaagaactt
ctggtcgcacttctgaaacttctgaagaagtacttgatggatgattctgttaaaattgta
gatatgacatctcaagctcttcggggaattctttcaactcaaaggggtcaaaatacgctg
ttgtcatttgattcttatgagaggtctcttatagaggttcactccaagggagtcaatatt
gagctggttgaaaagctccttttggatttggaaattaagtttaaagctgaagcaattcca
atcgagaactctactgtatgggtaacacatggtaaaacttttgatgaatggatttgtcca
cttgtctgctcactgatcggcttatgtagtgatgttattctgagattatgtcaggatatt
gtgttgatgaaagctgaagttgctgagcttttattggcaagtattattgtcaatcttgct
ggaaagaaggatatggatgttaatctctacaaattgatctctttgcaggtgcaggaacat
gtatttacagactctaataagttaatcaaatcaattcaagtatggttgaatgccctcaat
gaacttcgattgtgtcatgtgatggaaagatcttctttgttgccattaaagcaagaaagc
tccaagagtgctaagccttctagttacagctctaaatctcgttccacctctgtaaaggct
agagaatctgcttctatgtatggtgcaatggcaatgtcaacgccattatgggacaaggtt
tattggctttctattgattatcttgttgttgctaagtcagcagttgtttgtggctcatac
tttactgcgatgatgtatgtggaacattggtgtgaagaacatttcaatatcctgacactg
ggtagccctgatttctcccacttcgaaatgttgccacgccacattgaaatacttgttgca
gcagctacccagatcaatgaacctgacagcttatatgggattatccagtcacacaagtta
acctctcaaatcattaccttcgaacatgagggagactggagcaaggcccttgaatattat
gatttgcaagtgcgttcagctgctttggtaccaatggattttggttccaggagtttgtca
ctggaacagactcaacctgataatttttccaattccacaccggatgatccgatgaggcag
aggaaaccatataaaggtctgatcagatctttgcagcaaactggttgtatgcatgtcctg
gacttttattgtcaaggattgacatctagaaagggacagtttcatcatgatctggagttt
accgaattgcagtatgaggctgcttggcgtgcagcaaactgggatttctcgttactctat
gctggagataattctatttcatcaactctgcacatcaaagccaatcattttaatgaaaat
ttgcatagttgtttgagggcactaaaaaaggggaatttcaatgaatttcatgaaaagctg
aaagattcaaagcaggagcttgtttggtctgtttctcgtgcaagtgaagaaagtactgaa
catatatattcagcaataattaaactacagatcctctatcatcttggcaaggcatgggat
ttacgttggagatcatttccatctgagtgtatgaacttccatccacagatggaagaagtg
aattcagaacctctaatccctactgtggatcagttatcctggctgagcgtggattggagc
tccattttggagcgaacacagttacacatgagtttattagagccttttatagcgttcagg
cgagttctacttcaagtcttaaattgtaaggactctatggtgcaacatctcctgcaatcc
acgtgtactctccgtaagggatctagattttctcaagcagctgcagccttgcatgagttt
aagttcctttgtgttgaatcaggggaacaacagtcatccctttattggcttggaaggctt
gaagaagcaaagcttttgcgtagccaaggtcagcatgagatggctatcagccttgcaaag
tatgtggcagaatattccctgtcgaatgaagagtcttcagatgtacatcgcttggttggg
aagtggctggcagagactagatctagcagctcaagaactatattggagaagtatttgaaa
cctgctgtttcacttgttgaggatcagaaggctacagacaagaggtcgagagatagacaa
agccaaactcattttcatcttgcacactatgcagatgctctgtttaggagttatgaggaa
agactttcctccagtgagtggcaagcagccatgcgtctgaggaaacacaagacaacagag
ttggaagcacttattagacggctaaaatgttccacaaagggggagaagaccgattactct
atcaaaattcaagagttgcaaaagcagctagcaatggacaaggaggaggccgaaaagctt
caggatgacagggacaattttcttagcctagcattggatggatataaacattgtttggtt
gttggtgacaagtatgatgtaagagtggtttttcgactagtttctctgtggttctctctc
tcctctagaaaaagtgtcgtagatagcatgcttaccacaatcaccgaggttcagtcttac
aaattcatccctttggtgtatcaaattgcttcgagaatgggtagcttaaaggatagccag
ggttctcataatttccagtttgctttggtttctcttgtgaagaaaatggctatcgaccac
ccataccatactatatttcagcttctagcacttgcaaatggtgaccgtatcaaggacaag
cagcgaagtaagaattcatttgtggtagacatggataaaaagcttgcagcagagaatctt
ttacgagagttgacctcgtatcatggatctataataaatcaaatgaaacaaatggtggag
atctatatcaaacttgcagaactagaaacaaaaagagaggataccaatagaaagctgttg
ctaccaagagagttgcgtaatcttaaacagctggaacttgtgccagttgtgacagctacc
tttcccattgaccaaagttgtcaatatgatgaaggctctttcccatacttcaagggatta
gcagaatcagttacggtaatgaatggtataaatgctcccaaggtggtcgaatgcttaggt
tcggatggttgcagatacagacagctggcaaaatctggaaacgatgatctaagacaagat
gctgtaatggaacaattttttgccttggtcaacacctttttgcgaaaccaccgggataca
tggaaaagaagattaggagtacgcacgtacaaggtagttccatttactccaagtgccggg
gtccttgaatgggttaatggcactcttcctcttggtgaataccttataggaagcatgaga
aatggaggtgcacatggtcgctatggaataggggactggtcatttctcaaatgtcgagag
cacatggcaaatggaaaggacaagcgcaaggcattccaggaagtttgtggcaagttcagg
cctgtaatgcatcactttttcttggagagattcttacaaccagctgactggtttgaaaag
aggcttgcatacacccgaagtgttgctgcaagttcaatggttggttatatcgtcggcctt
ggggatcgacatgctatgaatatcttaattgatcaaactactgcagaagttgttcatata
gatcttggagttgccttcgaacaagggttgatgcttaagacaccagagcgggttccattc
cgactgacaagggacatcattgatggtatgggtgtcactggaatagaaggggtttttagg
cgatgctgtgaggaaactctttctgttatgaggacaaataaagaagcactactgaccatc
gttgaagtttttattcatgatcccctttataaatgggctctgtcacctctgaaagctttg
cagcgtcaaaaggaaatggattacgaatcagatacaagcttaggtgactcagaagatgaa
tatgaaggtaacaaggatgctgcacgtgcattgatgcgtgtcaaacaaaaattagatggg
tatgaagaaggagaaatgcgaagcatccatgggcaggtgcaacaacttatacaagatgct
attgaccctgagcgcctttgtcaactatttccaggatggggagcttggttgtga

DBGET integrated database retrieval system