Rosa chinensis (China rose): 112169986
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Entry
112169986 CDS
T06020
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcn01002
]
112169986
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112169986
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112169986
Peptidases and inhibitors [BR:
rcn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112169986
Ubiquitin system [BR:
rcn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112169986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
112169986
NCBI-ProteinID:
XP_024162886
LinkDB
All DBs
Position
6:63915057..63920064
Genome browser
AA seq
695 aa
AA seq
DB search
MHVAGVSLDLNWFLQLIFTLFVLAFGVLHLVKNTASKYFEVDANFDGGDRTPQMPGVLVN
DPACAVCGGSGVKKCSRCKAVKYCSQKCQTEHWRSGHKTECNDILAGRISSAQNTSSNGI
FKTPVRKNFKGIALVPTHGIISKRFKQPKKILFPYDEFVELFHWEKAGFSPCGLLNCGNS
CFANVVLQCLSSTRPLVAYLLEKGHRKECIRDEWCFLCEFESHLERASRSSQAFSPTNII
SRLPNIGGNLGYGRQEDAHELMRFAIDTMQSVCLDEFGGEKNVDPRSQETTIIQHIFGGQ
LQSQVICSKCNNISNQYENMMDLTVEIHGDASSLEECLVQYTGRESLHGENMYKCDGCND
YVKAWKRLSVKRAPNVLTIALKRFQSGRFGKINKRVTFPATLDLGPYMSEVGDGTDIYSL
YGVVVHVDMLNASYFGHYICYTKDFLGNWYRIDDCKVTTVYLEEVLSQGAYMLLYSRVQA
RLPCLSILEPPRKEEEMPNATLEVQTLPNEPVKCSAMESADLTPHYWSEPLDISLPPQIT
NCVEDSSAVLEHSDGITNVSSLISPSSASKDVHIIEEATVNSQSSPSTSGEISGCEKVPV
TTSDLDKVRTVPNGVDVANDKPYRAVSEEASECCEKDRSSADDMEWESSTLVAQDVEVCK
SNGTIDAANETASPVEHPGLMNGNGYHRLVQIDDG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcgccggagtgagcttggatctgaactggttcctgcaattgatattcactctg
ttcgttttagcgtttggggtgctacacttggtcaagaacacggcgtccaagtactttgag
gtcgacgccaatttcgacggtggtgatcggacgccccaaatgcccggcgtgctcgtcaac
gatcccgcctgcgccgtctgcggcggttccggcgtcaagaagtgctctcgctgcaaagcc
gttaaatactgctcgcaaaagtgccagacagaacattggagatcaggtcataagactgaa
tgcaatgatatactggctggcagaatcagctcagctcaaaacacgtcgagtaatggtata
tttaaaactcctgtgcgtaaaaatttcaaaggaattgcacttgttcctactcatggaatc
atctctaagcgtttcaagcagccaaaaaagattcttttcccctatgatgaatttgttgaa
cttttccattgggagaaggccggattttctccttgtgggctcttaaactgcggaaacagt
tgctttgccaacgttgttctccaatgcctttcatccactcgaccacttgttgcgtacttg
ttagagaagggccatcggaaagaatgcatacgggatgagtggtgcttcctgtgtgaattt
gaaagccatcttgaaagagcaagtcgaagttcacaggccttttctccaaccaacattatc
tctagactacctaatattggtggaaatcttggctatgggaggcaggaggatgctcatgaa
ctcatgaggtttgccattgatacaatgcagtcagtgtgtcttgatgagtttggtggagag
aaaaatgttgatcctcgctctcaagaaacaaccatcattcaacatatatttggtggtcag
ctacaatctcaggtgatttgttcaaaatgcaataacatatcaaaccaatatgagaatatg
atggatttaactgttgagattcatggggatgcttcatcattggaggaatgcctagtccaa
tacactggcagggagtcgcttcatggagaaaatatgtacaaatgtgatgggtgcaatgac
tatgtcaaggcttggaagagactttccgttaaacgtgctccaaatgttctgacaattgcc
ttgaagagatttcagagtgggcgctttgggaaaattaacaagagagttacattccctgcg
acgctagatctcggtccgtacatgagtgaagtgggagatggtacagatatttacagcctt
tatggtgttgttgtccatgtggatatgttgaatgcttcatacttcggtcattacatctgt
tataccaaggatttccttggaaactggtacagaattgatgattgcaaggttacgactgtt
tatttggaagaggtgctttctcagggagcatatatgcttttatatagcagggttcaggca
cgattaccttgtctaagcatccttgaacctccaaggaaagaggaggaaatgcccaatgcc
acccttgaagtacagactctcccaaatgaaccagttaaatgttctgctatggagtctgca
gatctaactccccattattggtctgagccactggacattagtctgcccccacaaataacc
aactgtgtagaagactcatctgctgtactagagcattctgatggtattacaaatgtgtcc
agtctcatatcaccctcatctgcttcaaaagatgttcacataattgaagaagctacggtc
aattcacagtcaagtccatccacttcaggggagatttctggttgcgagaaggttcctgtc
actacatcggatctggataaagtaagaacagttccaaatggcgtggatgtagctaatgac
aaaccatatcgggctgtgtctgaggaggcatcagaatgctgtgagaaggatcgctcttct
gcagatgatatggagtgggagtcgagcacactcgtggcacaggacgttgaagtttgcaaa
agcaacggaacaattgatgcagcgaatgaaacggcttctccagttgaacatccgggctta
atgaatgggaacggatatcatagattagtacagattgacgacgggtaa
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