KEGG   Rosa chinensis (China rose): 112169992
Entry
112169992         CDS       T06020                                 
Name
(RefSeq) squalene synthase 2 isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn00100  Steroid biosynthesis
rcn00909  Sesquiterpenoid and triterpenoid biosynthesis
rcn01100  Metabolic pathways
rcn01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    112169992
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    112169992
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rcn01006]
    112169992
Enzymes [BR:rcn01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     112169992
Prenyltransferases [BR:rcn01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   112169992
SSDB
Motif
Pfam: SQS_PSY CUX1_N
Other DBs
NCBI-GeneID: 112169992
NCBI-ProteinID: XP_024162894
LinkDB
Position
6:23900472..23907195
AA seq 413 aa
MGSLGAMLKHPDDIYPLLKLKMAARHIEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGT
ELRNAVCIFYLVLRALDTVEDDTAIETDVKLPILIDFHRHIYDPKWHFACGTKEYKVLMD
EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFHAAELEDLATDELSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKYEENSDKAVQCLNDMVTNALIHMEDCLKYMSALRDPAIFKFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTRTMADVYAAFYDFSSILKSKVDKKDPNATKTLSRL
ESVQKTCRDSGALINSRKSYIVNSEQSYNSSLIMVMFLILAIIYAYVSASPRF
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgggtagtttgggggctatgctgaaacacccagatgacatttaccctcttttgaagctc
aagatggcggccaggcacatcgagaagcagatccctcccgagcctcattgggctttctgc
tacaccatgcttcacaaggtctccaggagctttgctctcgttattcagcagctcggtacg
gagctccgtaatgctgtttgtattttttatctggttcttcgagctctagacactgttgag
gatgatacagccatagagacagacgtcaaacttcctatcctgatagatttccatcgtcac
atatatgatcccaagtggcattttgcatgtggtacaaaggagtacaaagttctcatggac
gagtttcatcatgtttcaactgcttttctggaacttgggaagggttatcaggaggcaatt
gaggatattaccaaaagaatgggggcagggatggcaaagtttatctgcaaggaggtagaa
acagttgatgactatgatgagtactgccactatgtggcaggacttgttggtttaggtttg
tccaagcttttccatgctgctgaattggaggatttggctactgatgaactttcaaattca
atgggcttatttcttcagaaaacaaacattattcgagattatctggaggatattaatgag
atacccaagtcacgtatgttttggccccgccagatctggagtaaatatgttaacaaactt
gaggacttgaaatatgaggaaaactcggacaaggcagtgcaatgtctgaatgacatggtc
actaatgctttgatacatatggaagactgcttgaagtatatgtctgctttaagagatcct
gctatatttaaattttgtgctatccctcagatcatggcaattggcacactagcactatgc
tacaacaacattgaggtcttcagaggtgtggtgaaaatgaggcgtggtcttacagcaaaa
gttattgacagaacaagaacaatggctgatgtctatgccgctttctatgatttttcatcc
attctaaagtccaaggttgacaagaaggatcctaatgctacaaaaacattgagcaggctg
gaatcagtgcagaaaacatgcagggactctggagcccttatcaacagcaggaaatcatat
atagtcaacagtgagcaaagttacaattcatctttgattatggtgatgtttctcatattg
gccatcatttacgcttatgtctctgccagcccaagattctaa

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