Rosa chinensis (China rose): 112170358
Help
Entry
112170358 CDS
T06020
Name
(RefSeq) cellulose synthase-like protein D4 isoform X1
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcn01003
]
112170358
Glycosyltransferases [BR:
rcn01003
]
Polysaccharide
Structural polysaccharide
112170358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
Glyco_tranf_2_3
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112170358
NCBI-ProteinID:
XP_024163385
LinkDB
All DBs
Position
6:44850808..44855596
Genome browser
AA seq
1136 aa
AA seq
DB search
MASLNNQPSKKAIRTPGGSAGSSQGKANSSGQTVKFARRTSSGRYVSLSREDLDMSGELS
GDYMNYTVHIPPTPDNQPMDTSVAVKAEEQYVSNSLFTGGFNSVTRAHLMDKVIDSEVTH
PQMAGAKGSACMMPACDGKVMKDERGVDITPCDCRFKICRDCYMDAQKDTNLCPGCKEPY
RMGDLDDDGPDYERGGALQLPGPDGNRDNMSMMKRNQTGEFDHNRWLFETRGTYGVGNAF
NPPEDGGYDEGFGPGSMDATEKAFKPLSRKIPIAAAVISPYRLLIFIRFIVLCFFLHWRV
VHPNNDARWLWMMSIVCELWFAFSWILDQTPKFFPINRATDLEVLYEKFDMPSPSNPTGR
SDLPGIDMFVSTADPDKEPPLTTANTILSILAVDYPVEKIACYISDDGGALLTFEAMAEA
ASFADLWVPFCKKHNIEPRNPDSYFALKVDPTKNKSRTDFVKDRRKIKREYDEFKVRING
LPDSIRRRSDAFHAREEMKMLKHMRETGADPLEQVKVPKATWMADGTHWPGTWSVPSSDH
AKGDHSGILQVMLKPPSPDPLMGGADDKLLDFTDVDIRLPMFVYMSREKRPGYDHNKKAG
AMNALVRTSAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDRGGEGVCYIQFPQRFEGI
DPSDRYANHNTVFFDSNMRALDGLQGPMYVGTGTMFRRFALYGFDPPNPDKVAAQKAATA
ATGDSETQKEPLTAPPAQTTQPLTASELDPDLDTNLLPKRFGNSTMLAESIPVAEYQGRP
LADHPAVKFGRPPGILRVPRDPLDATTVAEAVSAISCWYEDKTEWGDRVGWIYGSVTEDV
VTGYRMHNRGWHSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIIGSM
KLKLLQRLAYINVGVYPFTSLFLILYCFLPALSLYSGQFIVANVNVTFLAFLLTITLCLI
GLALLEVKWSGIGLEEWWRNEQFWLISGTSAHLAAVVQGILKVIAGIEISFTLTSKSAGD
ENDDVFAELHLVKWTWLMIPPIVIALVNIIAICIAVSRELYATNAQWAKLVGGTFFSFWV
LAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITLSLLWAAVAPPPGGGQAAGQFQFP
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttgaacaaccagccatccaagaaggcaatacgcacccccggaggttcagct
ggtagctctcagggtaaggctaattcaagtggccaaactgtgaaattcgctagacgaact
tcgagcggaaggtatgtcagtctctcaagagaagaccttgacatgtcaggggaattgtca
ggggactacatgaactacacagttcatattcctcccaccccggataaccaacccatggac
acttctgtggctgtcaaggcggaggagcaatatgtttctaactcactcttcaccggggga
ttcaacagcgtgacacgtgctcatttgatggacaaggtaattgattccgaggtgacacat
ccacagatggccggagccaaaggttcggcgtgcatgatgcctgcttgtgacggtaaggtg
atgaaggacgagaggggagtcgatataactccttgtgattgcaggttcaaaatatgtaga
gattgctatatggatgcacagaaggatacgaatctttgtcctggttgcaaggagccatac
cgaatgggggacttagatgatgatggaccagattatgagcgtggaggagcattgcaattg
cctggaccagatggaaatagggataacatgtcaatgatgaagaggaaccaaacaggtgaa
tttgatcacaacaggtggttgtttgagacaaggggtacctatggtgttggtaatgcattt
aatcccccagaggacggtggttatgatgaagggttcggaccaggatcaatggatgctacc
gaaaaggcttttaagccgctaagtaggaagataccaattgcagcagctgttatcagccct
tacaggttactgatctttattcgattcatagtgttgtgtttcttcttgcattggagagta
gtgcatccgaacaatgacgcaagatggttgtggatgatgtcaattgtttgtgagctgtgg
tttgccttctcctggattttggatcaaactccaaagttcttccctattaatcgtgctaca
gacctagaagtcctatatgaaaagtttgatatgccatctccttccaatcccactggtcgc
tcagacctccccggcattgacatgtttgtctctactgctgatcctgacaaggagccacct
cttaccactgctaacaccattctttcaatcttggctgttgattacccggtggagaagatt
gcatgctacatctccgatgatggaggtgctcttcttacttttgaggcaatggcagaggct
gctagttttgcagatttgtgggtgccattctgcaagaaacacaatattgaaccaagaaat
cctgatagttacttcgccttaaaagttgaccctaccaagaacaagagcaggactgacttt
gtgaaggatagaaggaagatcaaaagggagtatgatgagttcaaggtaaggattaacggg
cttcctgactctattaggagaagatctgatgccttccatgccagggaggaaatgaaaatg
ttaaagcacatgagggagaccggtgctgaccctttggagcaagtcaaggtcccaaaggcc
acgtggatggctgatggcacacattggccgggtacttggtccgtcccttcaagtgaccat
gcgaagggtgaccattcaggaattctacaggtgatgctcaagcctcctagccctgatcca
ctaatgggaggggcagatgacaagctcttagatttcacagatgttgatatacgactccca
atgtttgtgtacatgtcaagagagaagcggccaggctatgatcacaacaagaaagccggt
gccatgaatgccttggtacgaacttcagccatcttgtccaatgggccattcatcctcaac
ctcgactgtgaccactacatctacaactgcaaggccatccgagaaggaatgtgcttcatg
atggaccgaggaggagaaggtgtctgctacattcagttccctcagagatttgaaggcatt
gatccctcggatcgttatgccaaccataacactgtgtttttcgatagcaatatgcgtgct
cttgatggtcttcaaggtccaatgtacgtgggaactgggacaatgtttaggcggtttgcc
ctttatggttttgaccctccaaatcctgacaaggtcgcagcacagaaggcggcaacagca
gctactggtgactcagagacacaaaaagagcccttgacggcacctcctgcacagaccaca
cagcccttgacagctagtgaactcgaccctgatcttgataccaatctgctgcctaagcgt
tttggaaattctaccatgttagctgaatccatacctgttgctgagtatcaaggacgcccc
ctagctgatcatcctgcagtcaaattcggacgccctcctggtattcttagggtacctcgt
gatccacttgatgctacaactgttgctgaagctgtctccgccatttcttgctggtacgag
gacaagactgaatggggagaccgagtgggttggatttatggatcagtcacagaagatgtc
gtgacaggctaccgtatgcacaaccgtggatggcattcagtttattgcatcaccaagcgt
gatgcattccggggttcagctccgattaatcttactgatcgactccaccaagtgcttagg
tgggcaactggctctgtcgaaattttcttctccagaaacaatgccataattggttccatg
aaactgaaattactgcagcgtcttgcttacattaacgttggcgtctaccctttcacctct
ctctttctcattttgtactgcttcctccctgcactctcactctactctgggcagtttatc
gtggctaatgtcaatgtcaccttcttagcctttttgctaaccattacattatgcctgata
gggctggccctgctagaggtgaagtggtctggcataggattggaagagtggtggaggaat
gaacagttctggctcatttccggaaccagcgctcaccttgctgctgtggtgcaagggatt
ctcaaagttattgcaggaattgaaatctctttcacactcacttctaagtctgcaggagat
gagaatgatgatgtctttgcagaattgcaccttgttaagtggacttggttgatgattccc
ccaattgttatcgcactcgtcaacataattgccatttgcattgcagtttcaagagagctt
tatgctacaaatgctcagtgggctaagcttgttggtggaactttcttcagtttctgggtg
ttggctcatttgtatccttttgcaaagggtttgatgggaaggagaggaaagacgcctaca
attgtgtttgtttgggcaggtctcattgcaattacgctatccttgctctgggctgccgtt
gcgccaccaccaggaggcggacaagcggctggacaattccaattcccgtag
DBGET
integrated database retrieval system
