Rosa chinensis (China rose): 112170412
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Entry
112170412 CDS
T06020
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
rcn03015
mRNA surveillance pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112170412
09122 Translation
03013 Nucleocytoplasmic transport
112170412
03015 mRNA surveillance pathway
112170412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112170412
03041 Spliceosome [BR:
rcn03041
]
112170412
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112170412
TREX complex
112170412
Spliceosome [BR:
rcn03041
]
Complex C
Other components
EJC/TREX
112170412
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112170412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
GIDA
Motif
Other DBs
NCBI-GeneID:
112170412
NCBI-ProteinID:
XP_024163468
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All DBs
Position
1:56888926..56891773
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AA seq
320 aa
AA seq
DB search
MPFPQDRLDLPLDALIAESKQQRRHNSHAHHPRGHTGHFGGRGRGGSTSGPARRPMNHNA
YRTAPYPTLPEMQGQPGPRRIELPLALSQAMNREESTKLYISNLDYSVTNRDIELLFSEV
GELERHSIHYDKSGRSKGTAEVVYKHHSDALAAIERYNNQHLDGKKVEIKLVGLNVVSPV
PLLLPPNTNFLQEHPSPIFQRLGRVGSRRSFHGHGGVELERGRGRVRNGGPKVTTESQQW
KNVTPESQQWKNVTPESQQRKNVTAENQQRKNVTAENQQRKNVITESINRKKTFYGDTTV
TFEDLDADLEKYRLKGRPVN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccctcaggaccgcctggacctccctctcgacgccctcatcgccgaatccaag
caacaacgccgtcacaacagccacgctcaccacccacgagggcataccggtcatttcggc
ggcagaggccgtggaggctccacctcaggccccgctcgtcggccgatgaaccacaacgcc
tacagaacggcgccgtatcccactctgccagaaatgcaaggacagcctggacccagaagg
attgagctgccattggctttgagccaagcgatgaacagagaggaaagcaccaagctttat
atatctaacttggactatagtgttaccaatagagatatagagttgctcttctctgaggtt
ggtgagttggaaaggcactcaatccattatgataaaagtggaagatctaagggaacagct
gaagttgtctataagcaccattcagatgctctagcagcaatcgagagatataacaatcag
catcttgatggaaagaaagtggaaattaagcttgtgggactcaatgttgtttctcctgtt
cctctgcttctgcctccaaatacaaatttcttgcaagaacatccaagtcccatcttccag
aggctaggaagagttggttcaaggagatcgtttcatggtcatggtggtgttgaacttgaa
agaggccgtggacgggtgagaaatggtggcccgaaggttactacagaatctcagcaatgg
aagaatgtgactccagaatctcagcaatggaagaatgtgactccagaatctcagcaaagg
aagaatgtgactgcagaaaatcagcaaaggaagaatgtgactgcagaaaatcagcaaagg
aagaatgtgattacagaatctattaacaggaagaaaactttttatggagatacaactgtg
acttttgaagatctggatgctgatttggagaaatatcgcctaaaaggtaggccggtaaac
tga
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