KEGG   Rosa chinensis (China rose): 112170412
Entry
112170412         CDS       T06020                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03013  Nucleocytoplasmic transport
rcn03015  mRNA surveillance pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112170412
  09122 Translation
   03013 Nucleocytoplasmic transport
    112170412
   03015 mRNA surveillance pathway
    112170412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112170412
   03041 Spliceosome [BR:rcn03041]
    112170412
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     112170412
    TREX complex
     112170412
Spliceosome [BR:rcn03041]
 Complex C
  Other components
   EJC/TREX
    112170412
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112170412
SSDB
Motif
Pfam: RRM_1 FoP_duplication GIDA
Other DBs
NCBI-GeneID: 112170412
NCBI-ProteinID: XP_024163468
LinkDB
Position
1:56888926..56891773
AA seq 320 aa
MPFPQDRLDLPLDALIAESKQQRRHNSHAHHPRGHTGHFGGRGRGGSTSGPARRPMNHNA
YRTAPYPTLPEMQGQPGPRRIELPLALSQAMNREESTKLYISNLDYSVTNRDIELLFSEV
GELERHSIHYDKSGRSKGTAEVVYKHHSDALAAIERYNNQHLDGKKVEIKLVGLNVVSPV
PLLLPPNTNFLQEHPSPIFQRLGRVGSRRSFHGHGGVELERGRGRVRNGGPKVTTESQQW
KNVTPESQQWKNVTPESQQRKNVTAENQQRKNVTAENQQRKNVITESINRKKTFYGDTTV
TFEDLDADLEKYRLKGRPVN
NT seq 963 nt   +upstreamnt  +downstreamnt
atgcccttccctcaggaccgcctggacctccctctcgacgccctcatcgccgaatccaag
caacaacgccgtcacaacagccacgctcaccacccacgagggcataccggtcatttcggc
ggcagaggccgtggaggctccacctcaggccccgctcgtcggccgatgaaccacaacgcc
tacagaacggcgccgtatcccactctgccagaaatgcaaggacagcctggacccagaagg
attgagctgccattggctttgagccaagcgatgaacagagaggaaagcaccaagctttat
atatctaacttggactatagtgttaccaatagagatatagagttgctcttctctgaggtt
ggtgagttggaaaggcactcaatccattatgataaaagtggaagatctaagggaacagct
gaagttgtctataagcaccattcagatgctctagcagcaatcgagagatataacaatcag
catcttgatggaaagaaagtggaaattaagcttgtgggactcaatgttgtttctcctgtt
cctctgcttctgcctccaaatacaaatttcttgcaagaacatccaagtcccatcttccag
aggctaggaagagttggttcaaggagatcgtttcatggtcatggtggtgttgaacttgaa
agaggccgtggacgggtgagaaatggtggcccgaaggttactacagaatctcagcaatgg
aagaatgtgactccagaatctcagcaatggaagaatgtgactccagaatctcagcaaagg
aagaatgtgactgcagaaaatcagcaaaggaagaatgtgactgcagaaaatcagcaaagg
aagaatgtgattacagaatctattaacaggaagaaaactttttatggagatacaactgtg
acttttgaagatctggatgctgatttggagaaatatcgcctaaaaggtaggccggtaaac
tga

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