Entry |
|
Name |
(RefSeq) SWI/SNF complex subunit SWI3C
|
KO |
K11649 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C |
|
Organism |
rcn Rosa chinensis (China rose)
|
Pathway |
rcn03082 | ATP-dependent chromatin remodeling |
|
Brite |
KEGG Orthology (KO) [BR:rcn00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112170450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:rcn03021]
112170450
03036 Chromosome and associated proteins [BR:rcn03036]
112170450
Transcription machinery [BR:rcn03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112170450
Chromosome and associated proteins [BR:rcn03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112170450
PBAF complex
112170450
GBAF(ncBAF) complex
112170450
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6:58056699..58063774
|
AA seq |
799 aa
MPASPSFPSSDGRGKWRKRKRDPQIRRRPRDDDDDEDDDAAAADDNNNNNDLDHDDSDPS
AAAAAPDPAPHETEVLDGGLRHNDFPPVVLRTVNRPHSSVLALVAVERANHINSAGDGKG
PVSPLVLENVSHGQLQALSAVPADCPSLDQDRPDGASSAYVVTPPAIMEGRGVVKRYGSR
VHVVPMHADWFSPATVHRLERQVVPHFFSGKSPEFTPEMYMQSRNEIVAKYMENPEKRLT
VSDCTKLTSHLNTEDLTRIVRFLDHWGIINYSAAAPSPEPWNGNSYLREEQNGEIHVPSA
ALKSIDSLIKFDKPRCRLKAADVYKSLSCHDDDDDTSDLDNRIRKRLCENHCNYCSCSLP
SVCYQSQKEVDVLLCSDCFHEGRYVVGHSSIDFIRVDSTKDYGDPDGENWTDQETLLLLE
AMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNSSNRDDHGG
FYSTSNGNSAGSCLQDGDSESSFPFANSGNPVMSLVAFLASSVGPRVAASCAHAALAVLS
EDNGLPASGSNLQEGSGGHRMNLESMHGQGGAHKNIANSVQQKDEKSAGQGSWGKNEAGA
TPVPAEKVKAAAKAGLAAAAIKAKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEVE
TYLMKECEQVEKTRQRMVAERTRLISTRFGAAGVAPTINLAGVGPSMANNNSGNNRQQIM
PSSASQPSVSGYSNSQPVHSHMPFMPQQSMLGLGPRMPLASIQASSSAPNAMFNSPGTGR
PTLSHPMLRPVPGTSSGLG |
NT seq |
2400 nt +upstreamnt +downstreamnt
atgccagcttccccttccttcccatcttcagacgggcgcggcaaatggaggaagcgaaag
cgggacccccaaattcgccgccgcccgcgcgacgacgacgacgatgaggacgacgacgcc
gccgctgccgacgacaacaacaacaacaacgacctcgaccacgacgactccgaccctagc
gccgccgccgcagcacccgatcccgccccgcacgagaccgaggtcctcgacggtgggctc
cgccacaacgatttccctcccgtcgttttgcgcaccgtgaataggccccactcctcggtt
ctcgcgcttgttgcggtcgagcgggccaaccacattaactccgccggcgacgggaagggc
ccggtgagtcctctggtgttggagaatgtgtcccacggccagcttcaggccttgtccgcc
gtcccggccgattgtccgtcgttggatcaggaccgtccagatggcgccagttcggcttat
gtcgttacgccgccggcgattatggaaggccgcggcgttgtgaagcggtatgggagtaga
gttcatgtggttccaatgcacgcagattggttttcaccggctacagtgcatcgactggag
agacaggtggtgccacattttttctcaggaaaatcaccagagtttactcctgagatgtac
atgcaaagtaggaatgaaattgttgccaagtacatggaaaacccagagaagaggcttaca
gtttctgattgcacaaaattaacaagccatctaaatactgaagatttgactcgaatagtt
cggtttcttgatcactggggaattatcaattactctgctgccgcaccaagtcctgagcct
tggaatggtaattcctacttaagggaggagcaaaatggtgagattcatgttccatcagct
gcgttgaagtcgattgatagtctgataaaatttgacaagcccagatgtaggcttaaggca
gctgatgtttataagtcattgtcctgtcatgacgacgatgatgacacctctgatttggac
aacagaattcgaaaacgtctctgtgaaaatcattgcaattattgttcttgttctcttccc
agtgtatgctatcagtcacagaaggaggttgatgtactgctctgctctgactgcttccat
gagggaagatatgttgtgggccattcaagcatagatttcatacgagtggattcaacaaaa
gattatggcgatccagatggggaaaattggactgatcaagaaaccctactgctgcttgag
gccatggaaatctataatgagaactggaatgaaattgcagagcatgttggtacaaagtca
aaagcgcaatgcatacttcattttctacgtttgcctgtggaggatggcctgctggaaaat
attgaagttccaaagatgcctctgtcatccaactcgtcaaatagagatgatcatggcgga
ttttattcaacttcaaatgggaattcagcaggatcctgcctacaagatggtgattctgaa
agcagcttcccttttgcaaattctgggaatccagtcatgtccctggttgcctttctggcc
tcttctgttgggccaagagtcgctgcatcttgtgcccatgcagccttggcagtgttgtct
gaggacaatggcttacctgcttctggaagtaatttgcaggaaggatcaggaggacatagg
atgaacttggagagcatgcatggtcaaggtggcgctcataaaaatattgcaaattcagtt
cagcagaaggatgagaaatcagcaggacaaggttcttggggtaaaaatgaggcaggggcg
actccagtacctgcagaaaaagttaaagctgctgccaaagctggccttgctgctgctgca
ataaaagcaaaattgtttgctgatcatgaagaacgggaaattcagaggttatctgctaat
attgtaaatcatcagttgaagagattggagctgaagttaaagcagtttgcagaagtggaa
acttatctaatgaaagaatgtgaacaagtggagaagacaaggcagaggatggttgccgaa
cgtacccgtcttatatcaactcggtttggtgctgctggagttgctccaaccattaactta
gcaggtgttggtccttccatggccaataataattctggtaacaataggcaacaaattatg
ccatcttcggcttcccagccaagcgtatccggatacagcaacagccaaccagtccattct
cacatgcctttcatgccacaacaatcaatgctaggattgggaccgaggatgcccttggcg
tctatacaagcctcctcatcagctccaaatgccatgtttaattccccagggactggtcgg
ccgactctaagtcatccgatgctgaggcctgtaccgggtactagctctggtttaggttga |