KEGG   Rosa chinensis (China rose): 112170450
Entry
112170450         CDS       T06020                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3C
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112170450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112170450
   03036 Chromosome and associated proteins [BR:rcn03036]
    112170450
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     112170450
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    112170450
   PBAF complex
    112170450
   GBAF(ncBAF) complex
    112170450
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 112170450
NCBI-ProteinID: XP_024163513
LinkDB
Position
6:58056699..58063774
AA seq 799 aa
MPASPSFPSSDGRGKWRKRKRDPQIRRRPRDDDDDEDDDAAAADDNNNNNDLDHDDSDPS
AAAAAPDPAPHETEVLDGGLRHNDFPPVVLRTVNRPHSSVLALVAVERANHINSAGDGKG
PVSPLVLENVSHGQLQALSAVPADCPSLDQDRPDGASSAYVVTPPAIMEGRGVVKRYGSR
VHVVPMHADWFSPATVHRLERQVVPHFFSGKSPEFTPEMYMQSRNEIVAKYMENPEKRLT
VSDCTKLTSHLNTEDLTRIVRFLDHWGIINYSAAAPSPEPWNGNSYLREEQNGEIHVPSA
ALKSIDSLIKFDKPRCRLKAADVYKSLSCHDDDDDTSDLDNRIRKRLCENHCNYCSCSLP
SVCYQSQKEVDVLLCSDCFHEGRYVVGHSSIDFIRVDSTKDYGDPDGENWTDQETLLLLE
AMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNSSNRDDHGG
FYSTSNGNSAGSCLQDGDSESSFPFANSGNPVMSLVAFLASSVGPRVAASCAHAALAVLS
EDNGLPASGSNLQEGSGGHRMNLESMHGQGGAHKNIANSVQQKDEKSAGQGSWGKNEAGA
TPVPAEKVKAAAKAGLAAAAIKAKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEVE
TYLMKECEQVEKTRQRMVAERTRLISTRFGAAGVAPTINLAGVGPSMANNNSGNNRQQIM
PSSASQPSVSGYSNSQPVHSHMPFMPQQSMLGLGPRMPLASIQASSSAPNAMFNSPGTGR
PTLSHPMLRPVPGTSSGLG
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgccagcttccccttccttcccatcttcagacgggcgcggcaaatggaggaagcgaaag
cgggacccccaaattcgccgccgcccgcgcgacgacgacgacgatgaggacgacgacgcc
gccgctgccgacgacaacaacaacaacaacgacctcgaccacgacgactccgaccctagc
gccgccgccgcagcacccgatcccgccccgcacgagaccgaggtcctcgacggtgggctc
cgccacaacgatttccctcccgtcgttttgcgcaccgtgaataggccccactcctcggtt
ctcgcgcttgttgcggtcgagcgggccaaccacattaactccgccggcgacgggaagggc
ccggtgagtcctctggtgttggagaatgtgtcccacggccagcttcaggccttgtccgcc
gtcccggccgattgtccgtcgttggatcaggaccgtccagatggcgccagttcggcttat
gtcgttacgccgccggcgattatggaaggccgcggcgttgtgaagcggtatgggagtaga
gttcatgtggttccaatgcacgcagattggttttcaccggctacagtgcatcgactggag
agacaggtggtgccacattttttctcaggaaaatcaccagagtttactcctgagatgtac
atgcaaagtaggaatgaaattgttgccaagtacatggaaaacccagagaagaggcttaca
gtttctgattgcacaaaattaacaagccatctaaatactgaagatttgactcgaatagtt
cggtttcttgatcactggggaattatcaattactctgctgccgcaccaagtcctgagcct
tggaatggtaattcctacttaagggaggagcaaaatggtgagattcatgttccatcagct
gcgttgaagtcgattgatagtctgataaaatttgacaagcccagatgtaggcttaaggca
gctgatgtttataagtcattgtcctgtcatgacgacgatgatgacacctctgatttggac
aacagaattcgaaaacgtctctgtgaaaatcattgcaattattgttcttgttctcttccc
agtgtatgctatcagtcacagaaggaggttgatgtactgctctgctctgactgcttccat
gagggaagatatgttgtgggccattcaagcatagatttcatacgagtggattcaacaaaa
gattatggcgatccagatggggaaaattggactgatcaagaaaccctactgctgcttgag
gccatggaaatctataatgagaactggaatgaaattgcagagcatgttggtacaaagtca
aaagcgcaatgcatacttcattttctacgtttgcctgtggaggatggcctgctggaaaat
attgaagttccaaagatgcctctgtcatccaactcgtcaaatagagatgatcatggcgga
ttttattcaacttcaaatgggaattcagcaggatcctgcctacaagatggtgattctgaa
agcagcttcccttttgcaaattctgggaatccagtcatgtccctggttgcctttctggcc
tcttctgttgggccaagagtcgctgcatcttgtgcccatgcagccttggcagtgttgtct
gaggacaatggcttacctgcttctggaagtaatttgcaggaaggatcaggaggacatagg
atgaacttggagagcatgcatggtcaaggtggcgctcataaaaatattgcaaattcagtt
cagcagaaggatgagaaatcagcaggacaaggttcttggggtaaaaatgaggcaggggcg
actccagtacctgcagaaaaagttaaagctgctgccaaagctggccttgctgctgctgca
ataaaagcaaaattgtttgctgatcatgaagaacgggaaattcagaggttatctgctaat
attgtaaatcatcagttgaagagattggagctgaagttaaagcagtttgcagaagtggaa
acttatctaatgaaagaatgtgaacaagtggagaagacaaggcagaggatggttgccgaa
cgtacccgtcttatatcaactcggtttggtgctgctggagttgctccaaccattaactta
gcaggtgttggtccttccatggccaataataattctggtaacaataggcaacaaattatg
ccatcttcggcttcccagccaagcgtatccggatacagcaacagccaaccagtccattct
cacatgcctttcatgccacaacaatcaatgctaggattgggaccgaggatgcccttggcg
tctatacaagcctcctcatcagctccaaatgccatgtttaattccccagggactggtcgg
ccgactctaagtcatccgatgctgaggcctgtaccgggtactagctctggtttaggttga

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