Rosa chinensis (China rose): 112170496
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Entry
112170496 CDS
T06020
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112170496
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112170496
Ubiquitin system [BR:
rcn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
112170496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
UIM
UIM_2
UME
Motif
Other DBs
NCBI-GeneID:
112170496
NCBI-ProteinID:
XP_024163578
LinkDB
All DBs
Position
6:37540291..37550023
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AA seq
611 aa
AA seq
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MADQEEDLQMALRMSMQNSPPEPKRSKPRDADSPAEESSEVKTRRLQRELMATAAERRML
DARANAPPTPPAASPVSVSRSAAGSGSGSGLAPNVVRKERQLGAELSVGDAKQLFSMVFG
AEVSKGILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLAAIQALVLKYLLFYPDGLGKG
APNMHHNLGSRTLSSHCVASTNFSSLSEDAKARALLRSMGEILFSCGSNERAVVATLSVI
GGDVERFEGSKDEVIAKSLEGLSIESAADLHKVLRVNTYTTQESALRGLEAVIPVFRSRM
GALLFLISALLSRGLDLIQADRDDPSLPLVTAPFGHASQEIVNLLLCGQAVPNVFDGKMD
LGGGMSLKGISRTVEVGFLTLLESLNFCKVGQYLKCPKWPIWVVGSESHYTVLFAPDTSV
QDENELEGRESQIRKAFDAQDQSGGGGFISVEGFHQVLRETNVKVPSEKVDLLCSTGFIV
WSEFWQVILDLDKSMGGLKDSTGLMGKKVFDLYHFNGIAKSDLNGSQVSSGGETPVQRPR
LTKLRVSVPPRWTPEEYMTDVAVSSSGNESKSQVTEISKPEPPQHAPLVDCIRTRWPRAV
CNWVGDAPSIV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaggaggaggacctgcaaatggcactgaggatgagtatgcagaattcgccg
ccggagcccaagcggagcaagcccagggacgccgattcgccggcggaggagtcgtcggaa
gtcaagacccggcgacttcagcgagagctcatggctactgcagccgagaggagaatgctc
gatgccagggccaacgctcctcctactcctccggctgcctcaccggtctccgtttccagg
tctgcggcgggctcgggctcgggttcgggtttggcgcccaatgtggttaggaaagagagg
caattgggagcggagttgagcgtgggggatgccaagcagttgttttcgatggtgtttggg
gctgaggtttccaagggcattcttgcgcagtggagtaatcagggtataaggtttagccct
gatccagaaacatcgatgggtctagtgcagcatgaaggtgggccctgtggcgttttagca
gccattcaagcacttgttctcaaatacctccttttctacccagacggactaggtaaaggt
gcaccaaacatgcatcacaatttgggttcaaggacactttctagtcattgtgttgcatcg
actaacttttcctcactttctgaagatgcaaaagcaagagcattgcttagaagtatgggt
gagatattgttctcatgtggaagtaatgaaagggcggtggttgcaactttgagtgttatt
ggaggtgacgttgagaggtttgaaggcagcaaggatgaagtaatagcaaaatcacttgag
ggcctttctattgaatcagctgctgacttgcataaagtgctaagagttaacacatacacg
acgcaagaaagtgcattacgggggctagaagcagtgattcctgttttccgaagtcgtatg
ggggcattgctgttccttatttctgctttgctttcacgaggactggacttaatccaggct
gatagggatgatcccagcctacctcttgtcactgctccatttgggcatgcctcacaggaa
attgtgaacttactgctctgcgggcaggccgtcccaaatgttttcgacggaaagatggat
ttaggtggtggtatgtctttaaagggcatatccagaaccgtggaagttggattcctcaca
ctgttggagtcccttaatttctgcaaagttggccagtatttgaaatgccccaaatggcca
atttgggtagttggaagtgagtctcattacacagttctctttgctcctgataccagtgtc
caggatgagaatgaactggaaggaagggaatcacagattcggaaagcttttgatgcacaa
gatcagagtgggggtggtggtttcattagtgttgaaggctttcatcaagtccttagggaa
actaatgtaaaagttccaagtgagaaggttgatcttctttgcagcacagggtttattgta
tggagtgagttctggcaggtcattttggatctggacaagagcatgggaggcctcaaggat
tcaactggattaatgggcaagaaggtctttgatctttaccattttaatggaattgcaaaa
tcagatctgaatggaagccaggtaagctctggaggcgagactccagtgcaaagacctagg
ctcacaaaattgagggtgtcagttcctccaagatggactcctgaagaatatatgacagat
gtagcagtgtcctctagtgggaatgaatccaaaagtcaagtcacagaaatttctaagcca
gagcctcctcagcatgcacctttggtggactgcataagaacacgctggccccgtgctgtt
tgcaattgggtaggggatgcgcctagtattgtctga
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