Rosa chinensis (China rose): 112170504
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Entry
112170504 CDS
T06020
Name
(RefSeq) methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00280
Valine, leucine and isoleucine degradation
rcn01100
Metabolic pathways
Module
rcn_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112170504
Enzymes [BR:
rcn01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
112170504
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GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
MdcE
Motif
Other DBs
NCBI-GeneID:
112170504
NCBI-ProteinID:
XP_024163591
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All DBs
Position
6:13057570..13061481
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AA seq
568 aa
AA seq
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MLRILAKRGALGSWRSVSAVQITRDYSLGVLPDGVDRNSEAFSRNSKDMGLLISDLQSHI
QKVLAGGGPGAVKRNKSRNKLLPRERIDRLLDPGASFLELSQLAGHELYEDTLPSGGIIT
GIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAARCKLPCVYLVDSGGAFLPKQ
AEVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFL
AGPPLVKAATGEDVSAEDLGGASVHCKTSGVSDYFAQDELHGLTLGRNIIKNLHMAGKQG
LKSELRSISSEYKEPLFDVKELRSIAPTDHKQQFDIRSVIARIVDGSEFDEFKKLYGTTL
VTGFARIFGQPVGIIGNNGILFNESALKGAHFIELCTQRNIPLVFLQNITGFMVGSRSEA
NGIAKSGAKMVMAVSCAKVPKVTIIIGGSFGAGNYAMCGRAYSPDFMFLWPNAKISVMGG
AQAAGVLAQIERSNKKKQGIEWDKEEEEKFKAKVVEAYEKEGNSYYSTARLWDDGIIDPA
DTRKVIGLSIAATMNRDPEETKFGVFRM
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggattttggcgaagagaggagctttaggttcatggaggtcagtgagcgcagta
cagataacgagggattacagcctcggagtgcttcccgatggagttgatcggaattccgag
gccttttctcggaattctaaggacatgggtctcttaatctccgacctccaatcccacatc
caaaaggttctcgctggaggaggacctggagctgtgaagagaaacaagagcaggaacaag
ctccttcctcgagaacgcattgatcgcttgcttgatcctggtgcttctttccttgagctt
tctcagcttgcagggcatgaactatatgaagacacattaccatctggtgggataattact
ggaattggtcctgtccatgggaggctctgtatgtttgtggctaatgatcctactgttaag
ggtgggacttattatcccatcactgttaagaaacacctcagggcgcaagaaattgctgct
cgatgcaagttaccttgtgtgtatcttgttgatagcggaggggcttttcttcccaaacag
gcggaagtgtttcctgacagggagaatttcggtagaatcttttacaatcaagctttaatg
tcagctgaaggcattcctcagattgcgctggtattgggctcttgcactgctggcggtgcg
tatattcctgcaatggctgatgaaagcgtgatggttaagggaaatggtaccatatttcta
gcaggacccccacttgtgaaggctgccactggagaagatgtatcggcagaggatttgggg
ggtgctagtgtgcattgcaagacttcgggagtgtcagattattttgctcaagatgaactc
catggacttactcttgggaggaatattattaagaacttgcacatggctgggaaacagggt
ttgaaaagcgaattgcggagcataagttccgaatataaggaaccattatttgatgtaaag
gaacttcgttccattgcaccaacagatcataagcaacagtttgatattcgttcagttatt
gctcgcattgttgacggaagcgaatttgatgaattcaagaaattgtatggcactactctt
gtgacaggttttgctagaatcttcggacagcctgttggaattattggaaacaatgggata
ttatttaatgaatctgctctaaaaggggcccacttcattgaattatgtactcaacgaaat
attcctttggtcttccttcagaacatcaccggatttatggttggctcgagatctgaagca
aatggaatagcaaaatctggagcaaaaatggtgatggcagtttcttgtgccaaggtcccc
aaagttactattataattggtggaagctttggcgctggcaattatgcaatgtgcggtcgt
gcttatagtcccgatttcatgttcctttggccgaatgccaaaatatctgtgatgggtggt
gctcaggccgctggtgtccttgctcagatagaaagaagcaacaagaaaaaacaaggaatt
gagtgggacaaggaggaagaggaaaagttcaaggcaaaggtagttgaggcatatgagaaa
gaaggaaactcttattactctacagcacggctctgggatgatgggattattgatccagct
gacaccagaaaagtcataggtctctccatcgctgccactatgaaccgtgacccagaagaa
accaagtttggtgtattccgaatgtaa
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