Rosa chinensis (China rose): 112170562
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Entry
112170562 CDS
T06020
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112170562
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Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
Motif
Other DBs
NCBI-GeneID:
112170562
NCBI-ProteinID:
XP_024163664
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Position
6:complement(9440280..9442670)
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AA seq
596 aa
AA seq
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MAVDSSLPSPLGPPACEKDAKALQYIEQTTRNADAVQETVLAEILSRNAETEYLRRYKLG
GATDRKSFKSKLPVITYEDVQPEIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPT
IQEELDRRQSLYNLLMPVMNLCVPGLDKGKGLYFLFVKSESKTPGGLLARPVLTSYYKSE
HFKTRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLLERHQVLRLGAVFASGLLRAIHF
LQLNWQQLAADIRTGTLNPKITDPELRECMERKLKPEPELAEFVAEQCGEENWQGIITRI
WPSTKYLDVIVTGAMAQYIPTLDYYSGGLPMACTMYASSECYFGLNLNPMCRPSQVSYTI
MPNMAYFEFLPYEPNSVSFDPTRLVDLVDVVVGKEYELVITTYAGLYRYRVGDILRVTGF
HNSAPQFHFVRRKNVLLSIDSDKTDEAELQLAVDNATKLVLEKLNASVVEYTSFADTKTI
PGHYVIYWELLVKDSAESPSSESLSQCCLAMEESLNSVYRQCRVADNSIGPLEIRVVKSG
TFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSKHFSPSLPHWTPERRR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgactcgtcccttccttctcccctcgggccaccggcctgtgagaaagacgcc
aaggccttgcaatacatcgaacaaaccacccgaaacgccgacgccgtccaggagacggtg
ctcgccgagattctcagccgaaacgccgagaccgaatacctccgacgctacaagctcggc
ggcgccactgaccgtaaatcctttaaatccaagcttccagtcatcacttacgaggatgtc
cagccggaaatccaaaggatcgccaatggagatcgctcccctatcctctcggctcatccc
atctctgagtttctcaccagctctggtacttcagcgggtgagaggaagctgatgccaacg
attcaggaggagttggatcgtcgtcaatcactctacaacctcctcatgccagtcatgaac
ctttgtgtgcctggtttggacaaaggaaagggcttgtactttctgttcgtcaagtccgaa
tcaaagactccgggcggactcttggcccgacccgttttgaccagctactacaaaagcgag
catttcaagactcgcccttacgatccctacaatgtctacaccagccccaacgaggccatc
ctctgccccgactcgtttcaatccatgtacactcaaatgctctgtggcctcctcgagcgc
caccaagtcctccgcctcggcgccgttttcgcctccggtctcctccgcgccatccacttc
ctccagctcaactggcagcaactcgccgccgacatccgcaccggaacactcaaccccaaa
attaccgacccggagttgagggaatgcatggagcggaaactgaaacccgagcctgaactt
gctgagttcgttgccgaacaatgcggcgaggagaattggcagggaatcataacccgaatt
tggcccagtacaaaatatctcgacgtcatcgtcaccggagctatggcccagtatattccg
actttggattactacagcggcggcttacccatggcctgcaccatgtacgcttcatccgag
tgttacttcggactcaacctgaaccccatgtgcagaccttcacaagtttcatacacaatt
atgccaaacatggcttacttcgagttcctcccctacgagcccaactcagtgagttttgac
ccgacccgactcgttgacctggtcgacgtggtggtcggaaaagaatacgagctcgttatt
accacttacgccggactctaccgctaccgcgtcggcgacattctccgggtcaccgggttc
cacaactcggcgccgcagttccacttcgtgcggcggaagaacgtcctgctcagcattgac
tccgacaagaccgacgaggcggagctccagctcgccgtcgacaacgccaccaagctcgtc
ctggagaagctcaacgccagcgtggtggagtacaccagcttcgccgacaccaagaccata
ccgggccactacgtcatctactgggagcttctagtcaaggactcggccgagtcgcccagc
tcggaatcgctgagtcagtgctgcttggccatggaggaatcgctcaactcggtttaccgg
cagtgccgggtggcggacaactcgatcgggccgttggagattcgtgtggtgaagagcggc
acgttcgaggagttgatggactacgcgatctcgagaggcgcgtcgattaaccagtataag
gtgccgcggtgtgtgaattttaccccgataatggagttactggactccagggtggtttcc
aagcattttagcccttctttaccgcattggaccccggaaaggagacggtaa
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