Rosa chinensis (China rose): 112170760
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Entry
112170760 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: probable beta-D-xylosidase 5
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00520
Amino sugar and nucleotide sugar metabolism
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112170760
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
112170760
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
112170760
NCBI-ProteinID:
XP_024163833
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All DBs
Position
6:8819658..8824338
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AA seq
789 aa
AA seq
DB search
MKNQVLLHLSLSVLLVIVPIVAQQFACDTKAPRLSQFPFCNTSLPYEDRDKDLVSRLTLQ
EKVQQLVDASTGISRLGVPKYEWWSEALHGVSNVGPGTRFNATVPGATSFPAVILSAXSF
NESLWLRMGQVVSTEARAMYNLGLAGLTFWSPNVNVVRDPRWGRTQETPGEDPLVVSNYA
VNYVKGLQDVGEGNATGDRLKVSSCCKHYTAYDIDNWKGVDRFHFDAQVTKQDMEDTYQP
PFKSCEQEGHVSSVMCSYNRVNGIPTCADPDLLEGVVRGQWGLDGYIVSDCDSVEVYYDA
IHYSETREDAVALALKAGLNMNCGDYLGKYTENAVKLKKVEESVVDLSLIYNYIVLMRLG
FFDGDPKLLEFGNLGVSDVCSDEHKALALDAAKQGIVLLDNNGALPLSPTRTKNLAIIGP
NANATTVMISNYAGIPCSYTSPLQGLQKYVSTAKYEPGCSNVKCADESLIRGAVQAAATA
NAVVLVVGLDQSIEAEGLDIENLTLPGFQEKLVKQVVDATNGTVILVIMSAGPIDISFAK
NLSKVGWMLWVGYPGQDGGDAIAQVIFGDYNPAGKSPFTWYPQAYVDQVPMTDMNMRANT
SRRYPGRTYRFYTGKTVYEFGHGLSYSTFSKFIISAPCTLLIQSNSTATFNPHYNIQLEP
ISSITQEIDISSINCQSLAFDLVVGVRNKGPIDGSHVVLAFWKPPERLTGAPKLQLVGFE
RVEVKNRETKSLRMRVDVCKGLNLVDNEGKRKLVTGLHTILVGSPSEKQVKHYLSVRLAP
KHELKSLLE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccaagttctcttgcatctttcactgtcagtacttctcgtaatagtccccatt
gtagctcaacaatttgcatgtgacactaaagctccacgacttagccaatttcccttctgc
aatacttctctgccttacgaggaccgagacaaggacttggtctcgcgcctcactcttcaa
gaaaaggtccaacaactagtggatgcctccacaggcatttctcggctaggcgtgcctaaa
tatgagtggtggtccgaggcactccatggtgtttcgaacgttggcccaggcactcgcttt
aatgccacggtgcctggtgccactagtttcccagcagtgattctatccgcanagagtttt
aatgaatcactatggttgaggatggggcaagttgtgtcaaccgaggctcgagccatgtac
aatttgggtctagcggggttgacattttggagtcctaatgtcaatgtggtccgtgacccg
agatggggtcgaacgcaagagacaccgggggaggaccccttagttgtgtcaaattatgca
gtgaactatgtcaagggtctccaagacgttggtgagggcaatgccactggtgataggctc
aaggtctcaagctgctgcaagcattacactgcttatgatattgacaattggaaaggtgtt
gatagatttcactttgatgctcaggtgacaaagcaggacatggaggatacataccagcca
cctttcaaaagttgtgagcaggagggccatgttagcagtgtcatgtgttcatataatagg
gtgaatgggattcccacctgtgctgacccagacctgctggaaggggtagtcagaggccaa
tggggtctagatggatatatagtttctgactgtgattctgtggaagtttattacgatgca
atccattattctgaaacacgtgaggatgcagtagccctggccttgaaagcaggtctaaac
atgaattgtggggattatctagggaagtacacagagaatgcagtcaagttgaagaaagtg
gaagaatcagttgttgatctgtccttgatatacaactacatagtcctcatgaggcttggc
ttctttgatggtgatccgaaactgctggaattcggaaaccttggggtatcggatgtttgc
agtgacgaacataaagctttggcacttgacgctgctaagcagggcatagttttgctagat
aacaatggagctcttcctttgtccccaactagaaccaagaatttggccattattggacct
aatgcaaatgccactacggtcatgataagcaactatgctggaataccatgtagctacact
agccctctacaagggttacaaaagtatgtgtcgacagcaaaatatgagcccgggtgtagc
aatgtaaaatgcgctgatgagagcctcatccggggagcggttcaggctgctgccacagct
aatgcagtggtgttagtagtggggcttgatcagtccattgaagcagaagggctagacata
gagaacttgactttaccaggctttcaggaaaagcttgtgaagcaagttgttgatgcaaca
aatggaacagtcatcctggtaattatgtcagctggtccaattgatatttcgtttgctaaa
aatttgagcaaagtaggatggatgctatgggttgggtatccaggtcaagatggaggagat
gccatagctcaagtcatatttggggactataatccagctgggaagagtccttttacatgg
tacccacaggcgtatgtagaccaagtgcccatgacagacatgaacatgcgggccaacact
agtagaaggtaccctggaagaacatataggttctacactggaaaaaccgtctatgagttt
ggtcacgggctcagctattcaaccttttccaagttcataatctctgcaccttgcactctc
ctcatccaatcaaactccactgctactttcaacccacattataacattcaattggaaccc
atttccagcattacccaagaaattgacatatcaagcataaactgccagagcttagcattt
gatctagttgttggggtgaggaacaaagggccaatagatggctcccacgtggtgcttgca
ttctggaaaccaccagaacggttgactggggcaccaaagttgcagcttgtgggttttgaa
agagtcgaggtgaagaatagagagacaaagtcattgagaatgagggtggatgtgtgcaag
ggactgaaccttgtggataatgaagggaagaggaagttggtcaccgggctgcacaccatt
ctcgtcggctctcctagtgagaaacaagtgaagcactacctcagtgttaggctggctcca
aaacatgaattgaagtcactactagaataa
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