Rosa chinensis (China rose): 112171305
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Entry
112171305 CDS
T06020
Name
(RefSeq) protein FAR1-RELATED SEQUENCE 5
KO
K17604
zinc finger SWIM domain-containing protein 3
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112171305
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112171305
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Gene cluster
GFIT
Motif
Pfam:
MULE
FAR1
ZSWIM1-3_RNaseH-like
SWIM
Transposase_mut
PX
Motif
Other DBs
NCBI-GeneID:
112171305
NCBI-ProteinID:
XP_040363653
LinkDB
All DBs
Position
6:39144689..39148050
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AA seq
838 aa
AA seq
DB search
MDHKSPVPSTPDVEATDSCDCQISSKLEFGSGIELNCSVEVENNEVGGSEEKSEEATKPI
ETTDSIHSRMRQELIPAVGMEFETEHDADAFYNQYAYRFGFSTRLSKAHKSSSGLLRDRL
FVCSAEGKRGRDKRNPYVKSHRAETRFGCRAKMKIRYDLLSRKYSVVEFVADHTHVTTTP
SKTHLFRSHRKISLAQIVQADMAYDSGINPKETLELLSRQAGGREHLGFIPEDYKNYLRS
KRTREMKSGDTGGVLEYLQRMQLNDPNFVYAIQVDEDDLITNIFWADAKMMVDYDYFGDV
VRFDTTYRKNKEGRPFAMFVGVNNHKQTLIFGAALLYDETAETFMWLFDTFANTMSGKKP
KSILTDQDLAMAKALASQWPETHHRLCIWHIYQNAAKHLSSVFEQFKNFAEDFSSIIYDY
EDVEDFLIAWKKMLEKYNLQENKWLGRLFDLKEKWALVYGRETFCADITTTQRSESMNNS
IKKYVSYKYDLLRFFRHFQRLLDDRRYNESVANFKSSQTTPALSFPVKILRNAAKVYTPA
VFKWFQVELCKAHDCTLKLFGEIGTMRIYEVTAHGKRFHHTVTFDSVDNNISCTCKKFEF
AGILCSHALKILSTNNIKTIPSQYISKRWTKDIRDQRAKVSCPNANDDDQKAKIARRYRE
LARLHTELATSAAESDEAYEIAIVALHKTLADVKASLKKKTNQEAPEVVSGDFDDHRVRG
IKVKEKIVRKEESIRPKNALEKLLGNKRCKREVDISSRHQREPELDHSNVNSTFNPSLVN
STSAPALENQLNEKVLHINNSTHKPNVLPPQMQFTPPFQYVQVSSSVYFYYYFSGMLV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggaccacaaatctcctgtgccatcaacaccggatgtggaagctacggatagttgtgat
tgtcaaatatctagcaaattggaatttgggagtggtatagagttgaattgttctgtagaa
gttgaaaataatgaagttggaggtagtgaagaaaagtcagaagaagccacaaaacctatt
gaaacgactgattcaattcattctagaatgcgtcaagaattgattcctgcagttggtatg
gagtttgaaacagaacatgatgcagatgctttttacaatcaatatgcatatagatttggt
ttcagtaccagattaagtaaggcacataaatcctccagtggcctattgagggataggctc
tttgtttgctcagccgaaggtaaacgtggaagagacaagcgaaatccctatgtcaaatct
catcgtgctgagacaagatttgggtgtagagctaagatgaaaattaggtatgatctgtta
tccagaaagtatagtgttgtggaatttgttgctgatcatacccatgtgactacaactcct
agtaagacccatctttttaggtctcataggaaaatctctcttgcacaaattgttcaagct
gatatggcttacgattcaggaatcaatccaaaagaaactcttgaactattaagtagacaa
gctggtggacgtgagcatttgggatttattccagaagattataagaattatttacgttca
aagcgaacaagagaaatgaagtcaggggataccggtggtgttttggaatatctacaaaga
atgcagttgaatgatcctaattttgtttatgcaatacaagtggatgaggatgatttgata
accaatattttctgggctgatgcaaagatgatggtagactatgattactttggtgatgtg
gtaaggtttgataccacttacaggaaaaataaagaaggcagaccttttgcgatgtttgtt
ggtgtcaataatcataagcaaacacttatatttggtgctgcattgttatatgatgagact
gctgaaactttcatgtggttatttgatacctttgcaaatacaatgtctggaaagaaacca
aagagcattttgactgaccaagatcttgcaatggctaaagcattagcttcacaatggcca
gaaacacatcatcgactatgcatttggcacatatatcaaaatgcagctaagcatcttagt
agtgtgtttgagcagtttaagaattttgctgaagactttagcagtatcatatatgattat
gaagatgttgaagactttttaattgcttggaagaagatgcttgaaaaatacaatctccaa
gaaaataaatggttaggccggttatttgatttgaaggagaaatgggccttagtttatggg
cgagaaacattctgcgcagatattaccaccacccaacgcagtgaaagcatgaataattct
atcaagaagtatgtgagttacaagtatgatttgctgcgattttttcgtcattttcagaga
ttacttgatgaccgtcgttataatgagtcagtagcaaattttaaatcaagtcagaccact
cctgcattgtcattcccagtgaaaatattaaggaatgcagcaaaagtgtacacaccagca
gtgtttaaatggttccaagttgagttatgtaaagctcatgattgtaccttgaagttattt
ggtgagattggaacgatgcgcatatatgaagttactgctcatggaaagcgtttccaccat
acagtaacatttgactcggttgataataatatctcatgcacttgtaagaagtttgagttt
gctggaattttgtgttcacatgctttaaagattttatcgacaaataatatcaagaccatt
cctagtcaatacatctcaaagagatggacaaaggatattagagatcaaagagccaaggtg
tcttgtccaaatgcaaatgatgatgaccagaaagcaaaaatagcaagacgttacagagaa
ttggctcgattacatactgaacttgcaacaagtgctgctgaatctgatgaagcttatgaa
attgctatagtggcccttcacaagactttagcggatgttaaggcatctttaaaaaaaaag
accaatcaagaagcacctgaggttgtttctggtgattttgatgatcatagggttagagga
atcaaggttaaagaaaaaattgttcgtaaggaggaatctattagaccaaagaatgctttg
gaaaagctcttaggaaacaaaaggtgtaagagagaggtagatatttcatcaagacaccaa
agagaaccagaattagatcattccaatgtgaactccacatttaatccttcacttgttaat
tccacaagtgctcctgctttagaaaatcaattgaatgaaaaggttcttcatatcaataat
tcaactcacaagccaaatgttttgcctccacaaatgcagttcacaccaccatttcaatat
gtccaggtttcttcaagtgtctatttttactattacttttctggcatgcttgtttaa
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