Rosa chinensis (China rose): 112171344
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Entry
112171344 CDS
T06020
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112171344
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
WH_DRP
LRR_14
Rx_N
AAA_22
AAA_16
LRR_8
AAA_33
AAA_14
LRR_4
NPHP3_N
AAA_7
nSTAND1
Motif
Other DBs
NCBI-GeneID:
112171344
NCBI-ProteinID:
XP_040364476
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All DBs
Position
6:41236943..41246482
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AA seq
707 aa
AA seq
DB search
MAMASAAIDLLLGKIVSFLDDQLSLLGGVHDELEEIKRELIVMKDFLEDAERTGVVSEVE
KTWVANVRDVSVNVEDFIDEFTYHINNQRSWSPFTRTLRKSLRFPKNLWERHRIATKLQK
IIKIIKAFPERSLRNGVKPIEDAKEKSVTMLLSSQAQRTVISVVGMGGSGKSTLVAKTFN
GQTVKEHFDCCAWITVSQTYTVEDLLRVIMKELLRAVKEQIPVDLSDMSYSHLVEMLASY
LKEKRYMIVLDDVWDINLWRKISAALPDGPHGSRVMLTTRKENIASFAYGLGSYVHHVQP
LNKSEAWHLFSMKAFFSCPNSCCPTELEHIARDLVDKCEGLPLGIVALGALMSTKSVLAE
WMKVYGSLNWELCNNPRLEVVKSILLLSFNDLPYRLKHCFLYCCVFPEDYVIQCRRLIRL
WIAEGFVEQVRGPKTEEIAESYMAELTCRCMLQVVEREPSGRAETFRMHDLLRELCISIS
EAENFCTIYNDQEPAKESKARRVSMQANSRALRNPKDISKLPDDIVNCFNLMYLNLRRTK
VKELPKDIGKLSNLEMLNISNSKTRLLPVGILKLQKLHHLLMLHFNDQKLCSFDCLDGCT
QAPPGICKLKSLQVLDTVKVEGELIEQLQSMTQLTRLGLANVREADEKDLCKALENVKLI
EQLNVMTTDEDEVLRIYGRISGGSSNAQHTFPNWKVREDSTLVPFSS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcttcagctgcaatagaccttttgcttgggaaaatagtgtcatttcttgac
gaccaattgtcactgttaggaggagttcatgatgaacttgaagaaatcaagcgcgagctt
atagtcatgaaagacttcttggaggatgcagaaagaaccggtgttgtcagtgaagtggag
aaaacatgggtggcgaatgtgagggacgtttccgtaaacgttgaagacttcattgacgag
ttcacctaccacatcaacaaccagagaagttggagtccatttacaagaacgcttcgtaaa
tcccttcgcttccctaagaatctttgggagaggcatcggattgccacaaagttgcagaag
atcatcaaaattatcaaagcctttccagagagaagcctacgcaacggagttaaacctata
gaagatgctaaagagaagtcggtcacaatgttgttgtcttcacaagctcaaagaactgtg
atttctgttgttggaatgggtggctctggcaagtctaccttggttgcaaagaccttcaat
ggccagactgtaaaggaacatttcgattgctgtgcgtggattactgtctcgcaaacgtac
acggttgaagatctactcagagtaatcatgaaggagcttctccgagcagtgaaggagcag
attccagtagacttgagcgacatgagctattcacatttggtggaaatgctggccagctat
ttgaaggaaaagaggtacatgattgtcttagatgatgtgtgggatatcaatctttggaga
aaaataagtgcggcacttccagatggaccacatggaagccgggtcatgcttacaactcgt
aaagaaaacattgcttcttttgcatatgggcttggaagttatgtccaccatgttcagcct
ctaaacaagagtgaggcgtggcatcttttttccatgaaagctttcttcagttgtcctaat
agctgttgtccaactgagctcgaacatatagctagagatcttgttgacaaatgcgaaggc
ttacctctaggaattgttgctttgggcgctctcatgtcaaccaaaagtgttctggccgag
tggatgaaggtttacggcagcttgaactgggagctatgcaacaaccctaggcttgaagtg
gtgaagagcatcttactgttgagcttcaatgatttaccgtaccggctaaagcattgcttc
ctatattgttgtgttttccctgaagattatgtgatccagtgtagaaggcttattagactg
tggatagcggaggggtttgtggaacaagttagaggtccaaagacagaagagatagctgag
agctacatggcggagctcacgtgtcgatgcatgcttcaagtagttgagagggaaccatct
gggagggcagaaacatttaggatgcatgatcttctgcgagaactctgcatttcaatttca
gaagctgagaacttttgtaccatatacaatgaccaagaaccagctaaagagagcaaggct
cgccgcgtgtcaatgcaagcgaattctcgagcactaagaaatccgaaagacatttcgaag
ttgccagatgacatagtgaactgcttcaatttgatgtatttaaatttgagaagaacaaaa
gttaaagagcttcccaaagacatcgggaaactcagcaacttagaaatgctaaacataagc
aattcgaaaactagattacttccggttgggattttgaagttacagaagctacaccatctc
ttgatgttgcattttaatgatcaaaagttgtgttcttttgattgtcttgacggctgcaca
caagctccgccgggcatttgtaagctaaagagcttacaagttctggatacagtcaaggtg
gaaggcgagttgatcgaacaacttcagtccatgacgcaactcacaagactaggcttagca
aatgtgagggaagctgatgaaaaagatctatgcaaggcgctcgaaaacgtgaaactcatt
gagcagttgaatgtcatgacaaccgatgaggatgaggtgttgcgcatatatggacgcatt
agcggagggtcctccaatgctcaacacacttttcctaactggaaagttagagaggattcc
actttggttccattctcttcatag
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