Rosa chinensis (China rose): 112171400
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Entry
112171400 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 2 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112171400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112171400
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112171400
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
IQ_SCN5A_C
Peptidase_C50
DUF1016_N
Motif
Other DBs
NCBI-GeneID:
112171400
NCBI-ProteinID:
XP_024164360
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All DBs
Position
1:61734359..61739202
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AA seq
687 aa
AA seq
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MKRTSPPLPKTMSSPSHSRSNNGNGDDSFEFSSPECYACTQAGHPVFHSTRCRDPIHHSQ
LQWERSAGSSLTRVETPTDLKCSPTDLTRTRVIDPRSNYVKRLNRVVLMARGLAVAVDPL
FLYVIALSTSGASCFYMDVTLAFYVTVIRTCLDALHVAHILLQFKLAYVSSESMVIGCGK
LVWDPREIAWHYMKSFRRFWLDVFVILPIPQIVIWLIEPKLLRGERPTQIMVTVLLTFLF
QFTPKVYHIIHLAKRLKKVTGYIFSYGNIWWRFKLNVIAYLTACHIVGGIWYVLATQRVM
SCIQEQCESIKKCNLSLYCSRAIFSHGNFPEVKKIPKIKAMCFDEDTEFGYGIYQPILLV
YNGNTRAVRILYPIYWGLNNLGSFANNLTPTGDWLELIFSCCLCLAGLSLFITLLGNIQF
FLHSIMSNKKKMQLKYRDMEWWMHRRQLPHHLRKRVRHFQRCSWAAMQGLDEIDLIQNFP
DGLRRDIKRHLCLDLVLKVPLFHKLDGVILDNICDLVRPLIYSKGEKIIREGDPVQRMVF
LVHGRIKRSQGLSKGFLATSVLEPGAFFGDELLSWCLRRPFLGRLPPSSATFTTMGPVEA
FGLDAEFLRYISDQFRYKFSSENLRRTARYYSSNWRTWGAVIIQLAWRHHRERTKGSPTP
IQNWDIENRLKMYAAMFLSVKPQDHMD
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacttctccaccgctcccaaaaaccatgtcgtcaccatcgcactccaggtcg
aataatggcaacggagacgactcgtttgagtttagttccccggaatgctatgcttgcact
caggcgggtcatccggtgtttcactccacccgctgccgtgacccgatccaccattcccag
ctgcaatgggagcgctccgccggttcttctttgacccgggtggagaccccgacggacctc
aaatgcagccccaccgatctgacccggacccgggtcatcgacccgcgtagcaactacgtg
aaaaggttgaaccgtgtcgtcctcatggcacgtggcctggcggtagcggtggatccgctc
ttcctctacgtcatcgctttgagcacgagtggggcgtcctgcttctacatggacgtcacc
ctggccttctacgtgaccgtcattcgcacgtgtctggacgccttacacgtggcccacatt
ttgcttcagttcaagcttgcatacgtgtccagtgagtcgatggtgattggctgcgggaag
ctcgtgtgggacccgcgagagattgcgtggcactacatgaagtcctttaggcggttttgg
ctcgacgtctttgtcattctacctattcctcagattgtaatttggctaattgagccaaaa
ttgcttagaggagaacggccgacacagataatggtgaccgttttgctaaccttcttgttc
cagttcacccccaaggtctaccacattattcacttggccaaaagactaaaaaaggtcaca
ggttacatcttctcatatggcaacatttggtggcgtttcaaacttaatgtcatcgcctac
ttaactgcgtgtcacattgttggaggaatttggtatgttcttgcaacacaacgtgtaatg
tcatgcatccaagaacagtgtgagagtattaaaaagtgtaatctatctctctattgctca
agggcaatattttcccatggaaattttcctgaagttaaaaaaattccaaagataaaggca
atgtgctttgatgaggacactgaatttggctacggaatttaccagccgatccttcttgtc
tataatggcaatacacgtgccgttaggatcctttatcccatttactggggtttaaataac
ctaggctcctttgccaacaatctaactcctacaggtgactggctggaactgatattctct
tgctgtttgtgtctggcgggcttgagcctctttattactttacttggaaacatccagttt
tttctgcattcgatcatgtcaaacaagaagaaaatgcagttgaaatatcgagacatggaa
tggtggatgcatcgtagacagttgccgcatcatttgagaaagagagttcgacattttcaa
cgctgcagttgggcagcaatgcaaggactggatgagattgatttgatccaaaactttcct
gatggactccgaagggacatcaagcgccatctttgcctagatcttgtcttgaaggtaccg
ctattccacaagttggatggtgttattcttgacaacatatgtgatctagtccgtccacta
atctactccaagggtgaaaagataattagagaaggagaccctgtccaaaggatggtgttc
ttggttcatggacgcataaaacgtagtcaaggcctgagcaaagggttcttagccacgagt
gtgctagaacctggtgccttctttggggacgagcttctctcgtggtgcctccgccgtcca
tttttaggccgccttcctccctcatccgccacattcactaccatgggacctgttgaagca
tttggcctcgacgcagagtttcttcgctacatttccgatcaatttcggtacaaattctcc
agcgaaaacctcagacggacggcgaggtattactcgtcaaattggaggacttggggggct
gtcatcattcaacttgcttggcgtcatcacagggagaggactaagggtagtccaacacca
atacaaaattgggatattgagaaccggcttaaaatgtatgctgccatgttcttgtcagta
aagcctcaggaccatatggactag
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