Rosa chinensis (China rose): 112171478
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Entry
112171478 CDS
T06020
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112171478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112171478
03012 Translation factors [BR:
rcn03012
]
112171478
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112171478
Translation factors [BR:
rcn03012
]
Eukaryotic type
Release factors
112171478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
112171478
NCBI-ProteinID:
XP_024164427
LinkDB
All DBs
Position
6:48724133..48727138
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AA seq
443 aa
AA seq
DB search
MADYHETDKHIEMWKTKKLIKGLEAARGNGTSMISLIIPPRDQITRVTKMLDNEYGTASN
IKSRVNRQSVLCAIKSALQRLKGYNKLPPNGLVLYIGTIVTEDRKEKKIAINFEPFKPIN
VSLYLCDNKFHVEALNELLESDEKFGFIVIDGHGSLFGTLSGNTRKVLHNYTVDLPKKHG
RGGQSALRFARLGEEARHNYVSKAAENATKLFINPATNKPNVAGIILAGSADFKIVLSGS
DKFDPRLQAKILNVVSVRCGGENGFDQAIDLSSKILSNVKFVQEKRLMEKYFEEIRLDRG
MYVFGLDDTLKALERGAVKILIVSERLEISRYELKNSSTGEIVVKHLNKEQENNKSNFWD
SANSRELDIQDKMSLLEWFTEEYKGFGCTLELVTNKSQEGSHFCQGFGGIGGILRYQLDM
RSFDEFSDDEEVYDAGEVSDDAK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatcacgagaccgataaacacattgagatgtggaaaactaagaaactaatc
aagggacttgaagctgccaggggtaatggcaccagcatgatttctctcatcattcctccc
cgtgatcaaatcactcgtgttactaagatgttggataatgagtatggaactgcttcaaat
atcaaaagcagggtgaaccgtcagtctgttttatgtgcaattaaatctgctctgcagcgg
ctcaagggttacaacaagcttcctcctaatggacttgtgctctatattggaacaattgtt
actgaagacaggaaggagaaaaagattgcaattaattttgagcctttcaagcccatcaat
gtgtctctttacctctgtgacaacaagttccatgttgaagctcttaatgaactcttagaa
tctgatgagaaatttggtttcattgtcatagatggtcatggtagtctttttgggacatta
agtggtaacacgaggaaggtgcttcataactatactgttgacctcccaaagaaacatgga
agaggagggcaatcagctcttcgttttgctcgtcttggagaggaggcacgccacaactat
gtttctaaggcagcagaaaatgccactaagctttttattaaccctgccaccaacaagccc
aatgttgcaggaataatactggcaggatcagcggacttcaaaattgtgcttagtgggtca
gacaagtttgatccgcgtctgcaggccaaaatactgaatgtagtgagtgttcgttgtgga
ggagagaatggtttcgatcaggctatagacttgtcatcaaagattctatccaatgtgaaa
tttgtgcaggagaaacgcttgatggaaaaatactttgaagagattagattggatagagga
atgtatgtttttggtttagatgatacactaaaagctttggagagaggtgctgtgaagata
cttattgtgtcggaaagactggaaattagtaggtatgagctgaaaaactctagtactggt
gagattgttgtcaaacatcttaacaaagagcaagaaaacaataagagcaacttttgggat
tctgccaactctagagaactagatattcaagacaagatgtcattgttggagtggttcact
gaagagtacaaggggtttggttgtacgcttgagcttgtcaccaacaaatcacaagagggg
tcacatttctgccaaggttttgggggcattggaggaattctccgctaccagcttgatatg
agatcatttgatgagttttctgatgatgaagaagtttatgatgctggagaagtttctgat
gatgctaaatag
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