Rosa chinensis (China rose): 112171575
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Entry
112171575 CDS
T06020
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112171575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112171575
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112171575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
Motif
Other DBs
NCBI-GeneID:
112171575
NCBI-ProteinID:
XP_024164504
LinkDB
All DBs
Position
6:54240180..54243564
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AA seq
536 aa
AA seq
DB search
MDSTTQTFQHRPMSIKLWPATQSTRILLVERMTKNFITPSIFSRKYGLLSKEEAEEDARK
IEAFAFAAAEQQFEKEPYGDGSSAVQVYARESSKLMLEVLKRGPKAKEDDEKSIPAFKSV
FDISGGRRSFIDAEEAEELFKPLRELGNSYTKICLSNRSFGLDAARVAVPILSSIKHQLK
EVDLSDFIAGRSETEAIEVMNLFSSALEGCELRYLNLSDNAMGEKGVNAFGSLLRSQNNL
EELYLMNDGISEEAARAVSKFIPSTGKLRVLHFHNNMTGDEGAIAISDMVKRSPVLEDFR
CSSTRVGSEGGVALAEALGTCTHLKKLDLRDNMFGVESGVALSKVLSAFTELTEIYLSYL
NLEDEGTEALANALKDSAPLLEVLELAGNDITAKSTAALASCIAAKQFLTRLILSENELK
DEGSIMISKALAEGHGQLIEVDLSSNSIRRVGARLLAQAVVNKPGFKSLNINGNFISDEG
IDEVVDTFKNSPHLLGPLDENDPEGEDLDEEDEDEGADNEDELELRLKVLELRREE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggattctacaacacaaactttccagcaccgcccgatgtcaatcaaattatggcctgct
actcagagtaccaggatattgcttgtagaacgaatgaccaagaatttcataactccatcc
attttctctagaaagtacggcctgcttagtaaagaagaggccgaggaagatgccaggaaa
atagaagcctttgcctttgcagctgcagagcaacaatttgagaaggaaccatatggtgat
ggaagttctgcagtgcaggtatatgccagagaatcaagtaagcttatgctggaagttctg
aaaagagggcccaaagcaaaggaagatgatgagaaatctattcctgcctttaaaagtgtg
tttgatatctctggtggccgcagatcttttattgatgcagaggaggctgaggagcttttc
aaaccactaagggagcttggaaactcctatactaagatatgcttgagcaatagaagcttt
ggtttggatgcagcccgtgttgctgtgccaatcttatcatccatcaaacatcaattgaaa
gaagtggatctgtcagattttattgcaggaaggtcagagacagaagctattgaagtcatg
aatctgttttcttcagccctggaaggatgtgaattgaggtatctgaacctttcagacaat
gccatgggcgagaaaggtgtaaatgcatttgggtcactcctgagatcacaaaataatttg
gaggaactttatttgatgaatgatggtatttcagaagaagctgcaagagcagtttctaag
ttcattccgtccactgggaagcttagagtccttcattttcacaataatatgacaggagat
gaaggggcaattgccatctctgatatggtgaagcgttcacctgtcttggaggatttccgt
tgttcatctacaagggtgggctctgaaggcggtgtagctttagctgaagcacttgggact
tgcacacatttgaagaagctcgatttgcgtgacaacatgttcggtgtagaatctggggtt
gctttgagtaaagtcctatctgcttttacagaacttactgaaatttacctcagttatctt
aacttggaagatgaaggaacagaagcccttgccaatgctctcaaggattctgcacctttg
cttgaagttctggaattggcaggaaatgatattacagccaaatcaactgctgctttggct
tcctgtatagcagcaaaacaattccttactaggttaatattgtcagagaatgaactgaag
gatgaaggttcaattatgatcagcaaagcattggcagagggtcatggtcagttaattgag
gttgatttgagctctaattcaattagaagggttggggcgagacttttggctcaggctgtt
gtgaataaacctgggtttaagtcactgaacataaatggtaacttcatatctgatgagggg
attgatgaggtggtggacacgtttaaaaattccccacatctgcttgggcctttggatgag
aatgaccctgaaggagaagatctggatgaagaggatgaagacgaaggtgctgacaacgag
gatgaattggaattgaggctcaaggtccttgaactaaggcgagaggaatag
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