KEGG   Rosa chinensis (China rose): 112171603
Entry
112171603         CDS       T06020                                 
Name
(RefSeq) exopolygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn00040  Pentose and glucuronate interconversions
rcn01100  Metabolic pathways
Module
rcn_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    112171603
Enzymes [BR:rcn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     112171603
SSDB
Motif
Pfam: Glyco_hydro_28 Beta_helix Pect-lyase_RHGA_epim Phage_Gp111 NosD MrkH_YcgR_like
Other DBs
NCBI-GeneID: 112171603
NCBI-ProteinID: XP_040364522
LinkDB
Position
6:complement(55365846..55367780)
AA seq 644 aa
MLVAGFLKGLGIYTLVHSYKYTNILQAASKSTSYQSLAILFRILIMVLKSMNILAILLLS
FLASTAVADQSNVFDVTSSKYGGKPNSDISKALTMAWTDACASTSTSTVLVPRGTCKLLQ
AKFEGPCKAPIQFQLQGTLQAPKDRSQLDDFWISFNNIDMLTLSGGGTIDGQGALSWKEN
HDSTPVDIWFQTVNNSTISDIASIDSAKFHISVHGCNNVTFQRLTITAPEDSPNTDGIHI
SSSTKITVSDSYIATGDDCVSIGDGSNQILVSNITCGPGHGISIGSLGKYPDEQPVVGVT
VKNCTLTGTSNGARIKTWPDSPATSVACNILFQDMVMVNVKNPVLIDQNYCDKGKSCKQI
IPSKVQISNVTFKDIRGSSSSPVAVKLDCSHSAPCQNVELSDIDLTYSGDKKDEITSECN
NVKPRITGMTRALACANLGDIPIDNSPPPSTSPPLPPPLPASPPLPPFSPPLSPPAPFVL
PSQPPSSPPLSPPEPFISPSPLPSVPPLLPPPFVLPSPPPSSLPLSPPAPFVLPPPPPSL
PLLLPPPLVSPSPPPFLLPLSPPPFVSPPLPPMVDTPPPPTVASDDSSPPIIMVYGYPYP
LSHTDDGGFGPTSSAAGSILGQKPTVKVMVLSSALALWLLHALL
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgttggtggctggatttctaaaaggattgggaatttatactcttgttcattcctataaa
tacacaaacatcctacaagcagctagcaagagtacttcataccagagtcttgcaatctta
ttccgcatcctcatcatggttctgaaatcgatgaacattttggcaatacttttgctctca
tttttagcatccaccgctgtagctgatcaatccaatgtcttcgatgtgacaagctcaaaa
tatggtggaaagcccaactcggatatttcaaaggcattgacaatggcatggacagatgcg
tgtgcatcaacgtcaacgagtactgtccttgttccgaggggaacatgcaagttattacaa
gcaaaatttgaaggtccttgcaaggctcctattcagtttcagctccaaggaacattgcag
gctccgaaagaccggagccaactcgatgacttttggatttcctttaacaacatcgacatg
ctcaccttgtccggcggtggaactatcgacggacaaggagccctttcttggaaggagaat
catgactctactcccgttgatatttggttccaaactgtcaacaattccacaattagcgac
atagcttcgatcgacagcgcaaagttccacattagtgttcatggctgcaacaacgttacg
ttccaacggctcaccatcacagcacccgaagacagtcctaacaccgacggaatccacatc
tctagttcgaccaagatcacagtctccgactcctacattgcaaccggtgacgattgtgtt
tcaattggcgatggctccaaccaaatcctagtgtccaacattacttgcggaccaggtcat
ggaataagcataggcagtctaggaaagtatccagacgaacagccggtggtcggcgtcacg
gtcaagaactgcacgcttaccggcacaagcaacggcgcgagaatcaagacgtggcccgat
tctccggcaacaagcgttgcttgtaatatactcttccaagacatggtcatggtgaatgtg
aagaaccctgtcctcatcgaccagaactactgtgacaaaggcaagtcgtgtaagcaaata
attccatccaaagtccagatcagtaacgtgacgttcaaggatatcaggggctcgtcttcg
tctccggttgccgtcaagctcgactgtagtcacagcgcgccgtgccagaatgtggagctg
tccgatattgatctcacgtacagtggagacaaaaaagacgaaatcacgtccgagtgtaat
aatgtcaaaccgagaattaccggcatgactagggctcttgcttgtgccaatctaggtgac
ataccaatagataattcaccgccgccgtcaacttcaccgcctcttccaccgccgctgccg
gcttcacctcctcttccaccattttcgcctcctctttcaccgccggcgccatttgtttta
ccttctcaaccaccatcttcacctcctctttcgccgccggagccatttatttcaccttca
ccgctaccatctgtacctcctcttttgccgccgccattcgttttaccttctccgccacca
tcttcactgcctctttcgccgccggcgccatttgttttacctccaccgccaccatcttta
cctcttcttttgccgcctccattagtttcaccttctcctccaccatttttactgcctctt
tcgccgccaccattcgtatcacctcctcttccgccgatggtggacacacctcctccccct
acggtagcatcagacgattcgtctccgccgataataatggtgtatgggtatccatatcct
ctgtctcatactgatgatggtggttttggaccaacatcgtccgccgccggcagtattttg
gggcaaaaaccgacggtcaaagtgatggtgcttagttccgccctggctttgtggttgctg
cacgccttgttatga

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