Entry |
|
Name |
(RefSeq) exopolygalacturonase
|
KO |
|
Organism |
rcn Rosa chinensis (China rose)
|
Pathway |
rcn00040 | Pentose and glucuronate interconversions |
|
Module |
|
Brite |
KEGG Orthology (KO) [BR:rcn00001]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112171603
Enzymes [BR:rcn01000]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112171603
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6:complement(55365846..55367780)
|
AA seq |
644 aa
MLVAGFLKGLGIYTLVHSYKYTNILQAASKSTSYQSLAILFRILIMVLKSMNILAILLLS
FLASTAVADQSNVFDVTSSKYGGKPNSDISKALTMAWTDACASTSTSTVLVPRGTCKLLQ
AKFEGPCKAPIQFQLQGTLQAPKDRSQLDDFWISFNNIDMLTLSGGGTIDGQGALSWKEN
HDSTPVDIWFQTVNNSTISDIASIDSAKFHISVHGCNNVTFQRLTITAPEDSPNTDGIHI
SSSTKITVSDSYIATGDDCVSIGDGSNQILVSNITCGPGHGISIGSLGKYPDEQPVVGVT
VKNCTLTGTSNGARIKTWPDSPATSVACNILFQDMVMVNVKNPVLIDQNYCDKGKSCKQI
IPSKVQISNVTFKDIRGSSSSPVAVKLDCSHSAPCQNVELSDIDLTYSGDKKDEITSECN
NVKPRITGMTRALACANLGDIPIDNSPPPSTSPPLPPPLPASPPLPPFSPPLSPPAPFVL
PSQPPSSPPLSPPEPFISPSPLPSVPPLLPPPFVLPSPPPSSLPLSPPAPFVLPPPPPSL
PLLLPPPLVSPSPPPFLLPLSPPPFVSPPLPPMVDTPPPPTVASDDSSPPIIMVYGYPYP
LSHTDDGGFGPTSSAAGSILGQKPTVKVMVLSSALALWLLHALL |
NT seq |
1935 nt +upstreamnt +downstreamnt
atgttggtggctggatttctaaaaggattgggaatttatactcttgttcattcctataaa
tacacaaacatcctacaagcagctagcaagagtacttcataccagagtcttgcaatctta
ttccgcatcctcatcatggttctgaaatcgatgaacattttggcaatacttttgctctca
tttttagcatccaccgctgtagctgatcaatccaatgtcttcgatgtgacaagctcaaaa
tatggtggaaagcccaactcggatatttcaaaggcattgacaatggcatggacagatgcg
tgtgcatcaacgtcaacgagtactgtccttgttccgaggggaacatgcaagttattacaa
gcaaaatttgaaggtccttgcaaggctcctattcagtttcagctccaaggaacattgcag
gctccgaaagaccggagccaactcgatgacttttggatttcctttaacaacatcgacatg
ctcaccttgtccggcggtggaactatcgacggacaaggagccctttcttggaaggagaat
catgactctactcccgttgatatttggttccaaactgtcaacaattccacaattagcgac
atagcttcgatcgacagcgcaaagttccacattagtgttcatggctgcaacaacgttacg
ttccaacggctcaccatcacagcacccgaagacagtcctaacaccgacggaatccacatc
tctagttcgaccaagatcacagtctccgactcctacattgcaaccggtgacgattgtgtt
tcaattggcgatggctccaaccaaatcctagtgtccaacattacttgcggaccaggtcat
ggaataagcataggcagtctaggaaagtatccagacgaacagccggtggtcggcgtcacg
gtcaagaactgcacgcttaccggcacaagcaacggcgcgagaatcaagacgtggcccgat
tctccggcaacaagcgttgcttgtaatatactcttccaagacatggtcatggtgaatgtg
aagaaccctgtcctcatcgaccagaactactgtgacaaaggcaagtcgtgtaagcaaata
attccatccaaagtccagatcagtaacgtgacgttcaaggatatcaggggctcgtcttcg
tctccggttgccgtcaagctcgactgtagtcacagcgcgccgtgccagaatgtggagctg
tccgatattgatctcacgtacagtggagacaaaaaagacgaaatcacgtccgagtgtaat
aatgtcaaaccgagaattaccggcatgactagggctcttgcttgtgccaatctaggtgac
ataccaatagataattcaccgccgccgtcaacttcaccgcctcttccaccgccgctgccg
gcttcacctcctcttccaccattttcgcctcctctttcaccgccggcgccatttgtttta
ccttctcaaccaccatcttcacctcctctttcgccgccggagccatttatttcaccttca
ccgctaccatctgtacctcctcttttgccgccgccattcgttttaccttctccgccacca
tcttcactgcctctttcgccgccggcgccatttgttttacctccaccgccaccatcttta
cctcttcttttgccgcctccattagtttcaccttctcctccaccatttttactgcctctt
tcgccgccaccattcgtatcacctcctcttccgccgatggtggacacacctcctccccct
acggtagcatcagacgattcgtctccgccgataataatggtgtatgggtatccatatcct
ctgtctcatactgatgatggtggttttggaccaacatcgtccgccgccggcagtattttg
gggcaaaaaccgacggtcaaagtgatggtgcttagttccgccctggctttgtggttgctg
cacgccttgttatga |