KEGG   Rosa chinensis (China rose): 112171951
Entry
112171951         CDS       T06020                                 
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
  KO
K14948  polypyrimidine tract-binding protein 2
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcn03041]
    112171951
Spliceosome [BR:rcn03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    112171951
SSDB
Motif
Pfam: RRM_5 RRM_1 RRM_8 RRM_occluded RRM_PARP14_3 Nup35_RRM_2 TGF_beta
Other DBs
NCBI-GeneID: 112171951
NCBI-ProteinID: XP_024164844
LinkDB
Position
6:36243775..36252784
AA seq 444 aa
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQF
YANVQPAVRGRNVYVQFSSHQELTTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQV
FFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGLQATGARAVGFPQMANAAAIAA
AFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
MGDGFQAELAVHFLKGAILFGKRLEVNFSKHPNITQGADTHEYMNSNLNRFNRNAAKNYR
YCCSPTKMIHLSSLPQEVAEDEIVAHLEDIGTIVNTKLFEMNGKKQALVLFETEEQATEA
LVCKHATSLGGSIIRISFSQLQAI
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgacagaaccttccaaagtcattcacgttcggaatgtggggcatgaaatttctgaaaat
gatttgcttcagctatttcagccctttggagtcataactaagcttgtgatgcttcgtgca
aaaaaccaggctcttattcaaatgcaggatactgctgctgcagtaagtgcattgcaattc
tatgcaaatgttcaacctgctgtgaggggaaggaatgtttatgtccagttctcatcacat
caagaactaacaacaatgtatcaaaatgctcaaggacgaggagatgagccaaaccgaatt
ctcttagttacagtccaccacatgctatatcctataacagtggaagtgctgcatcaagta
ttttttcctcatggatttgtagagaagattgtcacgttccagaagtcagctggttttcag
gccctcattcagtatcagtctcgccaaagtgccgttgcagctagaactgcactgcaggga
cgcaatatttacgatggttgttgtcagctggacattcagttctcaaaccttgatgagttg
caagtgaactacaataatgagcgttcaagggatttcacaaatccaaatttgccttcggaa
cagaaaggaaaatccccacaacctggatatggtgattcaggaggcatgtatggccttcaa
gctactggagccagggcagttggattcccacagatggctaacgcggctgcgattgctgct
gcctttggtggaggtttgcctcctggtataagtgggacaaatgacaggtgtacggtcctt
gtgtcaaacttgaatcccgatagaatagatgaagataagctttttaacctgttctccatt
tatggaaacattgtgagaattaagcttcttcggaacaaaccagatcatgcactagtccag
atgggtgatggcttccaggctgaactggcagtacactttttaaagggtgcaatcctgttt
gggaagcgattggaggttaacttctcaaagcatccaaatataactcagggtgccgacact
catgaatacatgaattcaaatctcaaccgcttcaaccgtaatgctgcaaagaactaccgc
tattgctgctcacctacaaagatgatccacttgtcctctcttccacaagaagtcgctgaa
gatgagattgtggcccacctagaggatattggtaccattgtcaacacaaagctttttgag
atgaacgggaagaagcaggccttagttctgtttgaaactgaggagcaggccactgaagcc
cttgtgtgcaagcatgctacctcgcttggtgggtcaattatccggatctccttttcacag
ttacaggcaatatga

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