Rosa chinensis (China rose): 112171951
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Entry
112171951 CDS
T06020
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112171951
Spliceosome [BR:
rcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112171951
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Nup35_RRM_2
TGF_beta
Motif
Other DBs
NCBI-GeneID:
112171951
NCBI-ProteinID:
XP_024164844
LinkDB
All DBs
Position
6:36243775..36252784
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AA seq
444 aa
AA seq
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MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTAAAVSALQF
YANVQPAVRGRNVYVQFSSHQELTTMYQNAQGRGDEPNRILLVTVHHMLYPITVEVLHQV
FFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGKSPQPGYGDSGGMYGLQATGARAVGFPQMANAAAIAA
AFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
MGDGFQAELAVHFLKGAILFGKRLEVNFSKHPNITQGADTHEYMNSNLNRFNRNAAKNYR
YCCSPTKMIHLSSLPQEVAEDEIVAHLEDIGTIVNTKLFEMNGKKQALVLFETEEQATEA
LVCKHATSLGGSIIRISFSQLQAI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccttccaaagtcattcacgttcggaatgtggggcatgaaatttctgaaaat
gatttgcttcagctatttcagccctttggagtcataactaagcttgtgatgcttcgtgca
aaaaaccaggctcttattcaaatgcaggatactgctgctgcagtaagtgcattgcaattc
tatgcaaatgttcaacctgctgtgaggggaaggaatgtttatgtccagttctcatcacat
caagaactaacaacaatgtatcaaaatgctcaaggacgaggagatgagccaaaccgaatt
ctcttagttacagtccaccacatgctatatcctataacagtggaagtgctgcatcaagta
ttttttcctcatggatttgtagagaagattgtcacgttccagaagtcagctggttttcag
gccctcattcagtatcagtctcgccaaagtgccgttgcagctagaactgcactgcaggga
cgcaatatttacgatggttgttgtcagctggacattcagttctcaaaccttgatgagttg
caagtgaactacaataatgagcgttcaagggatttcacaaatccaaatttgccttcggaa
cagaaaggaaaatccccacaacctggatatggtgattcaggaggcatgtatggccttcaa
gctactggagccagggcagttggattcccacagatggctaacgcggctgcgattgctgct
gcctttggtggaggtttgcctcctggtataagtgggacaaatgacaggtgtacggtcctt
gtgtcaaacttgaatcccgatagaatagatgaagataagctttttaacctgttctccatt
tatggaaacattgtgagaattaagcttcttcggaacaaaccagatcatgcactagtccag
atgggtgatggcttccaggctgaactggcagtacactttttaaagggtgcaatcctgttt
gggaagcgattggaggttaacttctcaaagcatccaaatataactcagggtgccgacact
catgaatacatgaattcaaatctcaaccgcttcaaccgtaatgctgcaaagaactaccgc
tattgctgctcacctacaaagatgatccacttgtcctctcttccacaagaagtcgctgaa
gatgagattgtggcccacctagaggatattggtaccattgtcaacacaaagctttttgag
atgaacgggaagaagcaggccttagttctgtttgaaactgaggagcaggccactgaagcc
cttgtgtgcaagcatgctacctcgcttggtgggtcaattatccggatctccttttcacag
ttacaggcaatatga
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