Rosa chinensis (China rose): 112172044
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Entry
112172044 CDS
T06020
Name
(RefSeq) chaperone protein ClpB4, mitochondrial isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rcn03110
]
112172044
Chaperones and folding catalysts [BR:
rcn03110
]
Heat shock proteins
HSP100
112172044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
Clp_N
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
Zeta_toxin
Mg_chelatase
AAA_7
AAA_28
AAA_18
TniB
NACHT
NBD_SMAX1
AAA_24
Torsin
V_ATPase_I
TraD
Motif
Other DBs
NCBI-GeneID:
112172044
NCBI-ProteinID:
XP_024164976
LinkDB
All DBs
Position
6:complement(60684249..60688906)
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AA seq
982 aa
AA seq
DB search
MASRQAMKLSKSAMVLAAMNGASKTSTSSLSRCRETAVAASKFSMGGSVAPFNVVWDRNH
VVSAKYAANTLSRSFHSSGPRFNSASSAAQAQQNEFTEMAWEGIIGAVEAARNSKQQVVE
SEHLMKAILEQKDGLARRIFTKAGVDNTTVLQATDDFIAQQPKVMGATSGPIIGTHLGAL
LENARRQKKEMNDDFVSVEHLVLAFQSDPRFGQQLFKNLQLTDKDLKEAVKHVRGNQRVT
DQNPEGKYEALTKYGNDLTELASRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGV
GKTAIAEGLAQRIVRGDVPEPLLNRKLISLDMGSLVAGAKFRGDFEERLKAVLKEVTASN
GQIILFIDEIHTVVGAGATSGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALE
RRFQQVFCGQPSVEDTISILRGLRERYELHHGVKISDSSLVSAAVLSDRYITERFLPDKA
IDLVDEAAAKLKMEITSKPTELDEVDRAVLKLEMEKLSLQNDTDKSSKERLSKLESDLAL
LKQKQKEFNEQWDREKALMTRIRSIKEEIDRVNQEMEAAERAYDLSRAAELKYGTLMSLQ
RQLEEAEKNLSEYQKSGKSFLREEVTDLDIAEIVSKWTGIPLSNLQQSERDKLVMLEQVL
HKRVVGQDIAVKSVADAIRRSRAGLSDPNRPIASFMFLGPTGVGKTELAKALASYLFNTE
NALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYCVVLFDEIEKAHQDV
FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNLGSHYILETLRNTQDSKDAVYELMKRQ
VVELARQTFRPEFLNRVDEFIVFQPLDSKEICNIVEIQMNRVKDRLKQKKIQLHYTKEAV
ELLGKLGFDPNFGARPVKRVIQQLVENEIAMGLLRGDFSEEDAIIVDAEVSPSAKDIPPQ
KRLRIRKLENASSSVDDMVAND
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggctagccggcaagcgatgaagctcagcaaatcggcgatggttttggcggccatgaac
ggcgcctccaaaacctcaacaagttccctctctcggtgtcgtgaaactgcagtggccgcc
tccaagttttccatgggcggctccgtggctcccttcaatgtcgtttgggatcgaaatcat
gtcgtttcggccaagtatgcggcaaacactctcagtcggagctttcactcttcgggtcct
cgtttcaactccgccagcagcgctgctcaggctcagcagaatgagttcactgagatggca
tgggagggcataattggggctgtggaagccgccagaaatagcaagcaacaagtggtggaa
tctgagcacttgatgaaagctatcttggagcagaaggatggtttggccaggagaatcttc
accaaggctggtgtagacaacaccactgttctccaggccaccgatgacttcattgctcag
caacccaaggtgatgggtgcgaccagtggacctataataggcacacatctcggggctctg
ttggagaatgcccgaaggcagaagaaagaaatgaatgatgattttgtgtctgtggagcac
cttgtgttggcgtttcagtccgacccacggtttgggcagcaattgttcaaaaacctccag
cttactgacaaggatttgaaggaggctgttaaacatgttcgtggaaatcagagagtcact
gatcaaaatcctgaagggaaatatgaggctttgactaaatatgggaacgacttgactgag
ctcgccagtcgtggcaaacttgatccagttattggacgggatgatgaaatacggcgttgt
atccaaatactgtccaggagaacaaaaaataatcccgttattattggagagcctggtgtc
ggaaaaactgcaatcgctgaaggattagctcaacggattgtgcgtggggatgttccggaa
cccctattgaacagaaagttgatttctttagatatgggttcattggtcgctggagccaag
tttcgtggtgactttgaggaaagattgaaagctgtattgaaggaagttactgcttcaaat
ggacagatcatattattcattgatgagattcatactgttgtaggagcaggggctacaagt
ggtgcaatggatgctgggaacttgttgaaaccaatgcttgggcggggtgaactacggtgt
ataggagcaaccacgttgaatgagtacagaaaatacattgagaaggatcctgcactggag
cgtaggtttcagcaggttttttgtggtcagccatctgtcgaagacacgatatccattctt
cgtgggttgcgtgagcggtacgagctgcatcatggtgtgaaaatatcagatagttccctt
gtttctgcagcagttctttctgacagatacattacagaacgatttttgcctgacaaggcc
attgatcttgttgatgaagctgctgcaaagctgaaaatggagatcacatccaagccaact
gagttagatgaggtagacagagctgtactgaagttggagatggagaagctatctttgcaa
aatgacacagataaatcatcgaaagaaaggttaagcaagctggagagtgacctcgcattg
ctcaaacagaaacaaaaagaatttaatgaacagtgggatcgtgagaaggctctcatgact
cgaatacgatcaattaaagaagagattgatagagtaaaccaagagatggaagctgctgaa
cgtgcatatgacctaagtcgtgctgctgagctcaaatatggaactctaatgtccctgcaa
cgccagttagaagaggctgagaaaaacctttctgagtaccagaagtctggaaaatctttc
ctacgagaagaagtcaccgatcttgatattgctgagattgtaagcaaatggactggtata
cccttgtcaaaccttcaacagtcggaaagagacaagctagtcatgctagaacaggtactt
cataagagggtagtgggtcaagatatagccgtgaagtcggtagctgatgcaatcagacgt
tcaagggctggtctatcagacccaaaccgacctattgcaagtttcatgtttttgggacct
actggtgtggggaaaacagagcttgcaaaggccttggccagctatctcttcaacacagaa
aatgctctggttaggattgatatgagtgagtacatggaaaagcatgcagtttcacgtttg
gtgggtgctccgcctggttatgttggttatgaagaaggtggacaactaacagaagtggtt
cgtcgaagaccctattgtgtagtgctattcgatgaaatagagaaagcacatcaggacgtg
ttcaatattttgttacaattgctggatgatggaaggataaccgactcacaaggaaggact
gtaagcttcaccaattgtgttgtgataatgacctcaaatcttggctcccactatatactt
gaaactcttcgtaatactcaagacagcaaggatgcagtatatgagttgatgaaaagacaa
gtggttgaattggcgagacagactttccgccctgagtttttgaatcgagttgatgagttt
atcgtgttccagcctttggactccaaagagatctgtaacattgttgagatacagatgaac
cgggttaaagataggctgaagcaaaagaaaatccagcttcattatacaaaggaagctgtg
gagcttcttggtaaattgggctttgatccgaactttggagcaaggccagtaaagagggtg
atacagcagctggttgagaatgaaattgcaatgggactgttgagaggcgatttcagtgag
gaggatgcgatcattgttgatgctgaggtgtccccatccgccaaagatattcctccacag
aagaggttgcgcatcaggaaattggagaatgcttcttctagtgtagatgacatggttgcg
aatgactga
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