Rosa chinensis (China rose): 112172061
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Entry
112172061 CDS
T06020
Name
(RefSeq) protein indeterminate-domain 12
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112172061
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112172061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
DUF7128
Motif
Other DBs
NCBI-GeneID:
112172061
NCBI-ProteinID:
XP_024164997
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All DBs
Position
6:complement(52998573..53002853)
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AA seq
457 aa
AA seq
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MFPSVAAMSNSTSLSTEEAASVSSGSRLPDHFACLNPLSVSTIISSPLDHQQPPQKIKKK
RSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSS
KDLIKKRAYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKIYAVQSDWK
AHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSASQLAIATTPQISLFPF
PNHSHFTNPPPLPFTTLSPWDPPHNPNPNTTQNPLHHHVKPEETHHHFPLNPTLFQETPS
PQHKTLITSPFQHLHVSTQPTSSVATSAHLSATALLQKAATIGASAAGQQQSQSAGLAEF
GTLGGFTSGELTTWQKTDRLTRDFLGLTSADGNGCDHGNGAVNVVNDMLTYAGGAVEFQH
YHHDQRLRGHHALLKPQGFGFAETTASDTWGIVDQDI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttcggtagcagccatgtccaattcaacttctttgtccactgaagaagcagct
agtgtttcttctggttccagactcccagatcactttgcttgcttaaaccctctttcagtt
tcaaccattatctcttctcctctcgaccatcagcagccgccgcagaagattaaaaagaag
agaagcctccctggaaacccagaccctgatgccgaagtgatagcattatcccctaaaacg
ctcctggccacgaacagattcgtgtgcgagatttgcaacaaggggttccagagggaccag
aacctccagcttcacaggagaggccacaacctgccatggaagctgaagcaaaggagcagc
aaagacttgatcaaaaagagagcctatgtgtgccctgagccctcttgtgttcatcaccac
ccttcaagagcacttggggatctcacagggatcaagaagcacttttgcagaaagcatggg
gagaagaagtggaagtgtgacaagtgctcgaagatctatgctgttcaatctgattggaaa
gctcactccaaaacctgtggtacaagagaatatagatgtgactgtggaacccttttctcc
aggaaggatagcttcataactcacagagccttctgtgatgctctggctgaagaaagtgca
aggctctcagcaagccaattagctattgccaccacacctcaaatctctctcttccctttc
ccaaaccactctcacttcacaaacccacccccattaccattcaccaccctctctccctgg
gacccaccccacaaccctaaccctaataccacccaaaacccacttcaccaccacgtcaag
cctgaagaaactcaccaccacttccccctaaacccaactctcttccaagagaccccatca
cctcaacacaagactctgataacctctcccttccagcacctccacgtcagcacacagcca
acctcaagtgtcgccacgtcagctcacctgtcagccactgcgctgctccaaaaggccgcc
accattggcgcctccgcggctgggcagcagcagtctcagtcagctggcttggctgagttt
gggacattaggagggttcacgtccggagaactcaccacgtggcagaagactgaccgtctg
acgagggacttcctcggtctgacgtccgcggacggcaacggctgtgatcatgggaatgga
gctgttaacgtcgtcaacgatatgttaacgtacgccgggggagccgtcgagtttcaacac
tatcatcatgaccagcgtctgcgtggccatcacgctctgttgaagccccagggttttggg
ttcgcggagactactgcctctgacacgtgggggattgttgaccaagatatttga
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