Rosa chinensis (China rose): 112172120
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Entry
112172120 CDS
T06020
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A isoform X1
KO
K12819
pre-mRNA-processing factor SLU7
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112172120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112172120
Spliceosome [BR:
rcn03041
]
Complex C
Other components
Step II factors
112172120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
Motif
Other DBs
NCBI-GeneID:
112172120
NCBI-ProteinID:
XP_024165078
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Position
6:complement(51361365..51364849)
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AA seq
557 aa
AA seq
DB search
MSRGIKGIQVHSFDVFIAVGVVVAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPH
IPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTKSWYDRGAKIGQADKYRKGACQNCGAMS
HDIKSCMERPRKVGAKYTNKHIAPDEKVETFELDYDGKRDRWNGYDASSYALVIERYESR
DEARRKFLKEQQLKKLEGKNNNQNGEDGVSEEDEEEAEDEDDLRVDEAKVDESKQMDFAK
VEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKF
YAGDNRYRNSGQAMEFKQLNIHAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKENLKSHT
KDTILEKYGNAASEEAIPRELLLGQSEREVEYDRAGRIIKGQETTLPRSKYEEDVYVNNH
TCVWGSWWKDHQWGYRCCQQLTRNSYCTGAAGIEAAEAASDLMKANIARKEAAGEMPPPA
EEKRPATWGTDIPEDLVLDEKLLAEALKKEDARRKEERDERKRKYNVRWNDEVTAEDMEA
YRMKKVHHDDPMKEFLN
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaggaataaagggaatacaagttcatagttttgatgtattcattgctgttggt
gttgtagtggcattcaaatctagggaagatcatcgtaagcaaattgaattggaagaagcc
cgtaaggctgggctcgcaccagctgaactcgatgaggatggaaaggagatcaatcctcat
attcctcagtatatgtcatctgcaccttggtatctcaatgccgaaagacctagcttgaaa
catcaaaggaaatggaaatcagatccgaattacacaaaatcgtggtacgacagaggtgca
aagataggccaggctgataaatataggaagggtgcatgtcagaattgtggagccatgtca
catgatatcaagtcttgtatggaaagacccaggaaagtgggagcaaagtatacaaacaag
cacattgctcctgatgagaaggtagagacttttgagctcgactatgatggaaaacgggac
cgctggaatggatatgatgcatcatcctatgccctagtcattgagagatatgaatcaaga
gatgaagcacgaaggaaattcttaaaagaacaacaactgaaaaaattggagggaaaaaat
aataaccaaaatggtgaggatggggttagtgaagaggatgaagaggaggctgaggatgag
gatgatctgagggtggatgaagccaaggttgatgagagcaaacaaatggactttgcaaag
gttgagaagcgtgttcgtacaacaggtggtgggagcacaggaactgtcaggaatttgcgt
attcgtgaggatacagcaaaatatcttctaaaccttgacgtcaactctgcacattatgat
cccaaaacccgatccatgcgtgaggatcctcttccagatgctgatccaaatgagaaattt
tacgcgggtgataacagatatagaaatagtggtcaagctatggaattcaagcagctgaat
atccatgcttgggaagcatttgacaaaggccaagacattcacatgcaagcagccccgtcc
caggctgaattactttataagaactataaagtaattaaggagaatttgaagtcgcacaca
aaggacaccattctagagaagtatggcaatgcagctagtgaagaagcaattcctagggag
cttctactgggacagagtgaaagagaagttgaatatgatcgtgctggcaggattatcaaa
ggacaggaaaccacacttcccagaagcaagtatgaagaagatgtctatgtcaacaaccac
acctgcgtatggggttcatggtggaaggatcatcaatggggatacaggtgttgtcagcag
ttaactcgaaacagctactgcacaggtgctgctggaatagaggctgctgaggctgcatca
gatctgatgaaggccaatattgctcgtaaagaggctgctggagaaatgcctcctcctgca
gaggagaaaagacctgctacttggggaactgacatcccagaagatttggttttagatgag
aaactacttgctgaagctcttaaaaaagaggatgcaagaaggaaagaagagagagatgag
agaaaacgcaaatacaatgtcagatggaacgatgaggttactgcagaggatatggaggct
tacaggatgaagaaagttcaccatgatgatccaatgaaggagtttctcaactga
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