KEGG   Rosa chinensis (China rose): 112172140
Entry
112172140         CDS       T06020                                 
Name
(RefSeq) protein CHROMATIN REMODELING 35
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    112172140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112172140
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     112172140
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD SWI2_SNF2 zf-CCHC_2
Other DBs
NCBI-GeneID: 112172140
NCBI-ProteinID: XP_024165115
LinkDB
Position
6:22153891..22160015
AA seq 899 aa
MEPAVDMRPGKDATYDGLYSKGLKRLKLSSDRNVCDGMVLSASMHSEIVQKPCSTSAVVD
YTDPLAIQNLLEGLDDSGKYGSVAKDMKTFTAQIHQVLNPLLAKYPTLSNAYFKEERRHS
QLAPKLAIQRAPSLARNNVIDLDDDCVDSNAPAASLPIVIIDSDEEQNEDQRPSYSFQEV
FMTQPSYSFKDVILPQPSEQVFRKHLGVRDRVEEASLSTGTETNKDPGVYVGVEDEESTE
DDDGLGDAWMEMSMALESSKDVTVDPLSEERTSEGDCEHSFVLKDDLGYVCRICGVIDRG
IDTIFEFQYNKVKRSTRTYMPDSRNGKDRDSTETGGVKLSEDGLIITEISAHPRHMKQMK
PHQVEGFNFLVSNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPNARPLVVLPKGI
LDTWKKEFKYWQVEDIPLFDFYEAKADNRSQQLEVLKKWVDQKSILFLGYKQFSSIVCDR
ETNHISTSCQEILLKAPSILIMDEGHTPRNDNTDVFQSIAKLQTPRKVVLSGTIYQNHVK
EVFNILNLVRPKFLRSETSRPIIKRIMSRVDIKGARKQFKAGADNVFYELVEETLQRDTD
FRRKVTVIHDLREMTSKVLHYYKGDSLDELPGLVDFTVVLNLSAWQKQKFQKEFKKFARK
FKQSSVGSAVYLHPKLYSVSKDWKPSDSNEKMDELVETIDLNEGIKAKFFLNMLRLCESS
GEKLLVFSQYLPPLKFLERLTVKTKGWSPGRELFVITGESKSENREWSMERFNNSPDAKV
FFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKKKVFVYRLVAADSPE
EEDHRTCFQKELIAKMWFEWNEYCGYRDFEVDTVDVKDCGDLFLESPVLGEDVKVLYRR
NT seq 2700 nt   +upstreamnt  +downstreamnt
atggagccggcagtggatatgcggccgggtaaagacgccacttacgacggtttgtattcc
aaggggcttaagaggttgaaattgtcttctgatagaaatgtatgtgatggaatggtcttg
tctgcaagtatgcatagtgaaattgtacagaagccatgttctacttctgcagttgtcgat
tacactgatccattagctatacaaaacttgctggagggattagatgacagtggtaaatat
ggaagtgttgcaaaggacatgaagacatttactgctcagatacatcaagtactgaaccct
ttgcttgcaaaataccccacactatcaaatgcatactttaaagaggaaagaaggcatagt
caattggctcctaaattagcaattcaacgagctccgtcactagcacgaaataatgtcatt
gatttggatgatgactgtgtcgacagtaatgctccggcagcatcgttgcctattgtaatc
attgattcagatgaggaacagaatgaagatcagaggccttcttactctttccaggaggtt
ttcatgacacaaccatcttattctttcaaggatgtaattctgccacagccatctgaacaa
gttttcaggaagcacttgggggtgagggatcgagtagaagaagcaagtctgtctactgga
actgaaacaaataaagatccaggtgtttatgtgggtgtagaagatgaagaaagtactgaa
gatgatgatggtttaggagatgcatggatggaaatgtcaatggcgttagaatcttcaaag
gatgtcactgtagaccctttatctgaagaaagaacgagtgaaggcgactgtgagcattct
tttgtcttaaaagatgatcttggatatgtttgccgcatctgtggggttattgacagagga
attgatacaatttttgagtttcagtataacaaggtcaaaaggagtacaagaacgtacatg
cctgattctcgtaatgggaaagacagagattcaactgagacgggtggagttaaactttct
gaagatggtttgataataactgaaatatctgctcacccaagacatatgaagcaaatgaaa
cctcatcaagtggagggtttcaattttcttgttagcaacttagttggtgataatcctggt
ggttgcatcttggcccatgctccagggtctggtaaaacatttatgataatcagtttcatg
caaagtttcctagccaagtatccaaatgctagaccgctggttgttcttcctaagggaata
ttggatacatggaaaaaggagtttaaatattggcaagtagaagatattcctttatttgac
ttctatgaggccaaagcagacaatcggtcacagcagctggaggttttgaagaagtgggta
gatcagaagagtatcctgttcttagggtacaaacagttctcctctattgtttgtgatcga
gaaactaaccacatatcaacttcgtgccaggagatattgctaaaggcaccttcaattctt
attatggatgaagggcacacccctcggaatgacaacactgatgtattccaatccattgca
aaattgcagacacctaggaaagttgtactttctggaactatttatcaaaatcacgtgaaa
gaagtattcaacattctgaatcttgttcgtcctaagtttttaagatcagaaacttcccga
cccatcatcaagcgcataatgagtagggtagatataaaaggtgcaaggaagcagttcaaa
gctggtgctgataatgttttctatgaactagtggaggagactctgcagagggatacggat
ttcagaaggaaagtgactgtcatacatgacttgcgtgagatgaccagcaaggtccttcat
tactacaaaggagattccctggatgagcttcctggacttgttgatttcactgtggtactc
aatctaagcgcctggcagaagcagaaattccagaaggaattcaagaagtttgcaaggaag
ttcaagcaaagttcagttggcagtgctgtttatctgcacccaaaattgtactccgtctct
aaggactggaaaccctctgattcaaatgaaaagatggatgagttggtcgagacgatagac
ttgaatgaaggaattaaggcaaaattctttttgaatatgcttaggttatgtgagtcgtct
ggtgagaaacttttggttttcagtcagtacctcccacctttgaaatttttagagagatta
acagtcaaaacgaagggttggagtcctgggagagaattgtttgtgatcacaggggaatca
aagtctgagaatagggagtggtccatggagagatttaacaattcccctgatgctaaggtt
ttctttggctccatcaaagcatgtggagagggtatatctttagtaggggcatcacgagtc
ataattttggatgtccatcttaatccctctgtgacccggcaagcaattggccgtgcattt
agacctggtcaaaagaagaaagtatttgtatatagattggtagctgctgattcccctgaa
gaggaagatcataggacttgcttccaaaaagaattaattgccaaaatgtggtttgaatgg
aacgaatattgtggttatcgggattttgaagtggatactgttgatgtcaaagattgtggt
gatctttttcttgaaagtccagtgttgggggaagatgtgaaggttctgtacagaaggtag

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