Entry |
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Name |
(RefSeq) protein CHROMATIN REMODELING 35
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KO |
K10875 | DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] |
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Organism |
rcn Rosa chinensis (China rose)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:rcn00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112172140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:rcn03400]
112172140
DNA repair and recombination proteins [BR:rcn03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
112172140
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
6:22153891..22160015
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AA seq |
899 aa
MEPAVDMRPGKDATYDGLYSKGLKRLKLSSDRNVCDGMVLSASMHSEIVQKPCSTSAVVD
YTDPLAIQNLLEGLDDSGKYGSVAKDMKTFTAQIHQVLNPLLAKYPTLSNAYFKEERRHS
QLAPKLAIQRAPSLARNNVIDLDDDCVDSNAPAASLPIVIIDSDEEQNEDQRPSYSFQEV
FMTQPSYSFKDVILPQPSEQVFRKHLGVRDRVEEASLSTGTETNKDPGVYVGVEDEESTE
DDDGLGDAWMEMSMALESSKDVTVDPLSEERTSEGDCEHSFVLKDDLGYVCRICGVIDRG
IDTIFEFQYNKVKRSTRTYMPDSRNGKDRDSTETGGVKLSEDGLIITEISAHPRHMKQMK
PHQVEGFNFLVSNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPNARPLVVLPKGI
LDTWKKEFKYWQVEDIPLFDFYEAKADNRSQQLEVLKKWVDQKSILFLGYKQFSSIVCDR
ETNHISTSCQEILLKAPSILIMDEGHTPRNDNTDVFQSIAKLQTPRKVVLSGTIYQNHVK
EVFNILNLVRPKFLRSETSRPIIKRIMSRVDIKGARKQFKAGADNVFYELVEETLQRDTD
FRRKVTVIHDLREMTSKVLHYYKGDSLDELPGLVDFTVVLNLSAWQKQKFQKEFKKFARK
FKQSSVGSAVYLHPKLYSVSKDWKPSDSNEKMDELVETIDLNEGIKAKFFLNMLRLCESS
GEKLLVFSQYLPPLKFLERLTVKTKGWSPGRELFVITGESKSENREWSMERFNNSPDAKV
FFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKKKVFVYRLVAADSPE
EEDHRTCFQKELIAKMWFEWNEYCGYRDFEVDTVDVKDCGDLFLESPVLGEDVKVLYRR |
NT seq |
2700 nt +upstreamnt +downstreamnt
atggagccggcagtggatatgcggccgggtaaagacgccacttacgacggtttgtattcc
aaggggcttaagaggttgaaattgtcttctgatagaaatgtatgtgatggaatggtcttg
tctgcaagtatgcatagtgaaattgtacagaagccatgttctacttctgcagttgtcgat
tacactgatccattagctatacaaaacttgctggagggattagatgacagtggtaaatat
ggaagtgttgcaaaggacatgaagacatttactgctcagatacatcaagtactgaaccct
ttgcttgcaaaataccccacactatcaaatgcatactttaaagaggaaagaaggcatagt
caattggctcctaaattagcaattcaacgagctccgtcactagcacgaaataatgtcatt
gatttggatgatgactgtgtcgacagtaatgctccggcagcatcgttgcctattgtaatc
attgattcagatgaggaacagaatgaagatcagaggccttcttactctttccaggaggtt
ttcatgacacaaccatcttattctttcaaggatgtaattctgccacagccatctgaacaa
gttttcaggaagcacttgggggtgagggatcgagtagaagaagcaagtctgtctactgga
actgaaacaaataaagatccaggtgtttatgtgggtgtagaagatgaagaaagtactgaa
gatgatgatggtttaggagatgcatggatggaaatgtcaatggcgttagaatcttcaaag
gatgtcactgtagaccctttatctgaagaaagaacgagtgaaggcgactgtgagcattct
tttgtcttaaaagatgatcttggatatgtttgccgcatctgtggggttattgacagagga
attgatacaatttttgagtttcagtataacaaggtcaaaaggagtacaagaacgtacatg
cctgattctcgtaatgggaaagacagagattcaactgagacgggtggagttaaactttct
gaagatggtttgataataactgaaatatctgctcacccaagacatatgaagcaaatgaaa
cctcatcaagtggagggtttcaattttcttgttagcaacttagttggtgataatcctggt
ggttgcatcttggcccatgctccagggtctggtaaaacatttatgataatcagtttcatg
caaagtttcctagccaagtatccaaatgctagaccgctggttgttcttcctaagggaata
ttggatacatggaaaaaggagtttaaatattggcaagtagaagatattcctttatttgac
ttctatgaggccaaagcagacaatcggtcacagcagctggaggttttgaagaagtgggta
gatcagaagagtatcctgttcttagggtacaaacagttctcctctattgtttgtgatcga
gaaactaaccacatatcaacttcgtgccaggagatattgctaaaggcaccttcaattctt
attatggatgaagggcacacccctcggaatgacaacactgatgtattccaatccattgca
aaattgcagacacctaggaaagttgtactttctggaactatttatcaaaatcacgtgaaa
gaagtattcaacattctgaatcttgttcgtcctaagtttttaagatcagaaacttcccga
cccatcatcaagcgcataatgagtagggtagatataaaaggtgcaaggaagcagttcaaa
gctggtgctgataatgttttctatgaactagtggaggagactctgcagagggatacggat
ttcagaaggaaagtgactgtcatacatgacttgcgtgagatgaccagcaaggtccttcat
tactacaaaggagattccctggatgagcttcctggacttgttgatttcactgtggtactc
aatctaagcgcctggcagaagcagaaattccagaaggaattcaagaagtttgcaaggaag
ttcaagcaaagttcagttggcagtgctgtttatctgcacccaaaattgtactccgtctct
aaggactggaaaccctctgattcaaatgaaaagatggatgagttggtcgagacgatagac
ttgaatgaaggaattaaggcaaaattctttttgaatatgcttaggttatgtgagtcgtct
ggtgagaaacttttggttttcagtcagtacctcccacctttgaaatttttagagagatta
acagtcaaaacgaagggttggagtcctgggagagaattgtttgtgatcacaggggaatca
aagtctgagaatagggagtggtccatggagagatttaacaattcccctgatgctaaggtt
ttctttggctccatcaaagcatgtggagagggtatatctttagtaggggcatcacgagtc
ataattttggatgtccatcttaatccctctgtgacccggcaagcaattggccgtgcattt
agacctggtcaaaagaagaaagtatttgtatatagattggtagctgctgattcccctgaa
gaggaagatcataggacttgcttccaaaaagaattaattgccaaaatgtggtttgaatgg
aacgaatattgtggttatcgggattttgaagtggatactgttgatgtcaaagattgtggt
gatctttttcttgaaagtccagtgttgggggaagatgtgaaggttctgtacagaaggtag |