Rosa chinensis (China rose): 112172169
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Entry
112172169 CDS
T06020
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00900
Terpenoid backbone biosynthesis
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Module
rcn_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112172169
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcn01006
]
112172169
Enzymes [BR:
rcn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112172169
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112172169
2.5.1.29 geranylgeranyl diphosphate synthase
112172169
Prenyltransferases [BR:
rcn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112172169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
112172169
NCBI-ProteinID:
XP_024165175
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All DBs
Position
6:complement(42350831..42352358)
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AA seq
329 aa
AA seq
DB search
MAFSVVTTPAHFHIPKKLTFRIRCCAASSVSTRSKSTRFDLKTYWTTLIADINHKLNEAV
PVRYPELIYESMRYSVLADGAKRASPVMCVAACELFGGDRLAAFPTACALEMVHAASLIH
DDLPCMDDDPSRRGQPSNHTVYGEDMAILAGDALFPLGFQHIVSNTPSDLVPEARLLRVI
TEIARTVGSTGMAAGQFLDLEGGPNAVEFVQEKKFGEMGECSAVCGGLLAGAKDEEVDRL
RRYGRAVGVLYQVVDDILEEKKNGKDENEKKEKKGKSYVKVYGVEKAIEVAEKLRSQAKQ
ELDGFEKYGDGVVPLHSFVDYAVDRSFSL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctcagtggttacgactccggcgcatttccacataccgaaaaagcttactttc
cgaattcggtgttgcgcggcttcatcggtttcgacccgatcaaagtcgacccggttcgat
ttgaaaacctactggacgacgctgatcgccgatatcaaccacaagcttaacgaggcggtt
ccggttcggtatcctgagctgatctacgagtccatgcgctactctgttctcgccgacggt
gccaagagggcttctccggtcatgtgcgtcgccgcctgtgagctcttcggcggtgaccgc
ctcgccgcgttccccaccgcctgtgctctcgaaatggtgcatgcagcttcactcatacac
gatgatcttccttgcatggatgacgacccgtctcgtcgcgggcagccttctaaccacaca
gtctacggcgaagacatggcaattcttgctggtgatgctctgtttcctttaggatttcag
cacattgtgtcaaacacgccttcagatcttgtgccagaggctcgacttctgcgtgtgatc
acggagattgccagaactgttgggtccaccggcatggcggctggtcagttccttgacctg
gaaggagggcctaatgcggttgaattcgtgcaggagaagaagtttggggaaatgggtgag
tgttctgctgtctgcggaggactgctagctggtgccaaagatgaggaggtagacagactg
aggaggtacgggagagctgttggggttttgtaccaagtggttgatgatattcttgaagag
aagaagaatggtaaggatgagaatgagaagaaggagaagaaagggaagagctatgtgaaa
gtttatggggttgaaaaggctattgaggtagcagagaagcttagatcccaagctaagcag
gagttagatgggtttgagaagtatggtgatggtgtggtgccacttcatagctttgtggat
tatgcagttgatagaagttttagtctttaa
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