Rosa chinensis (China rose): 112172276
Help
Entry
112172276 CDS
T06020
Name
(RefSeq) TMV resistance protein N
Organism
rcn
Rosa chinensis (China rose)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
LRR_8
C-JID
LRR_4
AAA_22
NACHT
AAA_16
LRR_3
AAA_14
LRR_1
AAA
ATPase_2
Viral_helicase1
MeaB
DUF3335
KAP_NTPase
Bac_DnaA
Motif
Other DBs
NCBI-GeneID:
112172276
NCBI-ProteinID:
XP_024165327
LinkDB
All DBs
Position
6:6068559..6077313
Genome browser
AA seq
1146 aa
AA seq
DB search
MTSTWYPRRRWKYDVFLSFRGEDTRETFTCHLYRALTAKGIITFLDDESLERGSTIGPSL
FTAIQDSRWAIVVLSENFASSSWCLDELSKIVQCLVERGRLVIPIFYRVAPSDVRLQRGS
FQLRTLEVREHEEVYGNKDKLKEWRHALTKMGNFVGFDSKNYEDDGKLVEAIVEYTLKFL
HDTYTSSSVDKGFIGMDSRIDDLLSNYICPQLGRVRFIGIHGMRGIGKTTLARAIHDEIC
QDFDRSCILYNVREKSEKDGLVSLQEKLLSRILRTKVDIEDEYAGATMIERRLCKLKVLV
VIDDVDHINQLDKLAGSRDWFGPGSRIIVTTPDIHLLREHDVDATYKATGLTRGEAIQLL
SLKAFKKSFPPEDYLDLCHHIIRYAQGLPLALVVLGSFLFGRRPNEWESTIERLNNTPNR
QVMDVLQISFDGLEEKDKQIFLHIACLYKGKDRDRVTQILGYCKLEPGIGLRVLEEKSLI
TIFNNKLSMHDLLQEMGLEIVRRQSPEEPGKRSRLWSPEDIHNVLKKNKGTDKIRAMVMD
LPELEVAHWKPEAFSNLSQLSLLHIRNVDLPEGLTFLSNSLRLLDWSGYPLRSLPQNFEP
DQLIELNLCHSNIEHLWKGAKNFDKLKFIKLCHSQKIVQTPDLTGVQNLETLDLEGCKTL
VKLHQSLGQLKRLIVLNLKDCENLENLPSMIEMESLETLILSNCSKVKKIPEFAGNMKRL
SKLYLGETAIEKLPVSIGCLSGLASLNLSNCKNLVCLPSTFSILESLENVNLSGCLKLGE
QDSARENGAIRTAVNHLIKRGCEDVGKYLSWSLPSRLVQRADIEPISMKLPVSDLCYSTE
QNANTSMSIRLPLSHLCNLTDLNLSNCNLSDTAFANFACFPSLVALNLSGNNFVKLPPSI
RSCFKLQNINLENCKTLQELSGLPSNSKLDVRADGCSSLEMLFDVSNFNRLEKLYFNFIN
CFKLNDNQGCSNIAFEMLRTFSNQRISSATETFQIVIPGSRIPEWFACRIFGSSLIVGLV
PGWNKSRILGFVLCAVFVLHEHRHVDELDICQFKTFKATHHLVCCLNLNGRELEVYGKQP
AFRFSEQFCQVESDHLWIFYVSRDKYCGPDWCHNSCSQLDFLFETRGPGLEVKECGLRLI
YEQDVI
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaacttggtatcctcgtcgacgatggaaatacgatgtttttctaagcttcaga
ggggaagatacccgcgagactttcacctgccatctgtatcgtgcgctaactgcgaaagga
attataacatttctagatgacgaaagcctggagagaggatcaaccattggcccatcactt
tttacagcaattcaggactcaagatgggccattgtcgttctttcagagaatttcgcttct
tcatcctggtgcttggatgaactctcgaagattgttcaatgcttggtagagaggggacga
ttagtcatcccgatcttctaccgagtggctccctctgatgtgcgcctccaaaggggaagt
tttcagctccgtacactagaggttagggaacatgaagaagtttatgggaataaggacaaa
ctaaaggagtggagacatgctttgacaaagatgggcaattttgttgggtttgattcgaaa
aactatgaggatgacggaaaattggttgaggccattgttgagtatacactaaaatttcta
catgatacttatacctcttcaagtgttgacaagggcttcataggaatggattcccgtatt
gatgatttattaagcaattacatatgtccgcagcttggtcgggtgcgttttatagggatc
catggcatgcggggcataggtaagacaacacttgctcgagctatccatgatgaaatttgt
caagattttgacagaagctgcattctttacaatgttagagaaaaatctgaaaaggatggt
ctagtttctctacaagaaaaactactttccagaatcctgaggacaaaagttgacattgag
gatgaatatgcaggagctactatgatagaaaggcggttatgtaaactaaaggtgcttgtt
gttattgatgatgtggatcacatcaatcaattagataaattggctggaagtcgggactgg
ttcggtccggggagtagaattattgtaaccactccagatattcatttgctaagggaacat
gatgttgatgctacatacaaggctactgggttaactcgtggtgaagctattcaactattg
agtttaaaggctttcaagaaaagcttcccaccagaagattatttggacttgtgccaccat
attatacggtatgctcaggggcttccgttggctcttgtggttttaggttcttttctattt
ggtagaagacccaatgaatgggaaagtacaatagagaggctaaacaatacaccaaataga
caagttatggatgtgcttcagattagttttgatggactagaggaaaaagacaaacagata
ttcctacatattgcttgtttgtacaaggggaaggacagggatcgtgtgacacaaatacta
ggctattgcaagctagaacctggcattggtttaagggttcttgaggaaaaatctctcatt
actatttttaacaacaaactgtcaatgcatgatttgctacaagaaatgggcttggaaata
gttcgtcgacagtcccctgaagagccaggtaaacgaagtagattatggtctcctgaagat
atccacaatgtgctgaagaaaaataagggaacagacaaaatccgagccatggtaatggac
ttgcctgagttagaagtggctcattggaaaccagaagccttttcaaatttgtctcaactc
agtcttctccatattcgtaacgtggatcttcccgaaggcctcacttttctatctaattcc
ttgagactccttgattggagtgggtaccccttaagatccctcccacaaaattttgaacca
gaccaacttattgaacttaacttgtgccacagcaacattgaacacctctggaaaggagca
aagaattttgacaagttaaagttcatcaaactatgccattctcaaaaaattgtccagacc
ccagacctcacaggcgttcaaaatcttgagactttagatcttgaaggatgtaagactttg
gtaaaacttcatcaatccctcggacaactcaaaaggcttattgtattgaatcttaaagat
tgcgagaatctcgagaacctgccaagtatgattgaaatggaatctcttgaaactttaatt
ctttctaactgctcaaaagttaaaaagattcctgagttcgctggaaatatgaagcgttta
tcaaagctttatctcggtgagactgccattgaaaaactacctgtgtcaattggatgcctg
agtggccttgcttcactgaatcttagcaactgcaaaaatcttgtttgccttccaagcacc
tttagtatattggagtctcttgaaaatgttaatctttctggatgtttgaaacttggggaa
caggatagtgcaagggagaatggtgcaattagaactgctgtaaaccatcttataaaacgt
ggttgtgaagatgttgggaaatatctgtcatggtccttgccttctagattggtgcaaaga
gccgatatagagccaataagtatgaagttgcctgtatctgatctgtgttattctacagag
caaaatgcaaatacatcaatgagtatccggttgccactatctcatctatgtaatttaaca
gatctaaacttaagtaactgcaatcttagtgacactgcatttgccaactttgcctgtttt
ccctccttagtggcactaaatctgagtggaaataattttgttaagcttcctccaagcatc
aggtcctgttttaagcttcagaacattaatttggagaattgcaagacacttcaagaatta
tcaggacttccatcaaatagtaaattggatgtgagggcagatggttgttcttcactggaa
atgctgtttgatgtatccaatttcaatagattggagaaattatatttcaatttcatcaat
tgcttcaaactaaatgacaatcagggctgcagtaacatagcgtttgaaatgctgaggaca
ttcagtaatcagcgaatttctagtgccacggaaacttttcaaattgtaattcctggaagc
agaattcctgagtggtttgcttgtcgaatatttgggagttcattaattgtaggcctagtt
cctggttggaataaaagtaggattttgggatttgttttgtgtgctgtttttgtactccat
gagcaccgtcacgttgatgagcttgatatctgtcagttcaagacttttaaagctactcat
catcttgtatgttgcctgaacctcaatggaagagaattagaagtatacggcaaacagcct
gcatttcgctttagcgaacaattttgccaggttgagtcagatcacctttggatattctat
gtgtcccgtgataaatactgtggtcctgattggtgccataacagttgcagtcagcttgat
ttcttatttgaaacaagagggcctggtctggaggtgaaggagtgtgggctacgtctgata
tacgagcaagatgtgatatag
DBGET
integrated database retrieval system
